Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1578 |
Symbol | |
ID | 6463329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1669053 |
End bp | 1670378 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727799 |
Product | amino acid carrier protein |
Protein accession | YP_002018439 |
Protein GI | 194336645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.152771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTACTC TTGAAAAAGT ATTGGATCAG ATCAGCGGTT ATGTATGGGG AGTTCCCTTG CTGGTGCTTC TTTTCGGGAC ACATCTTTTT TTGACCTTTC GGCTTGGTTT CATCCAGAAG TATACTTTCC GGGCTATCAG GATGTCGTTC ACCAGAAGCA GTGAGGGTGA AGGGGAGATC AGCCATTTTG GAGCGCTTGT TACGGCGCTT GCAGCAACCA TAGGAACCGG CAATATTGTT GGTGTTGCTA CAGCCGTTGC TGCTGGCGGT CCGGGGGCAG TGTTATGGAT GTGGCTGACC GGTGTCTTCG GTATTGCTAC CAAATATGCA GAAGCGGTGC TTTCTGTGAA ATATCGCACG GTTGCAGAGG ATGGTACGGT TTCGGGAGGC CCGATGTATG TTCTCGAAAA AGCGATGAAG ATGAAATGGC TTGCCGTGCT TTTTGCTCTT TTCACCTCCG TGGCTGCTTT TGGTATTGGT AATATGGTAC AGGCTAATTC CATTGCGACG ATGGTTCAGC ATAACTTCCA TGTCTCCACC TGGATAACCG GTGTTGTGTT AACCGTTTTT ACTGCGGTTG TCATTATCGG CGGCATCACC TCCATTGCAA AGGTCTGTGA ATATCTGGTT CCCTTTATGG CCTTCTTTTA TGTGGCCGGC TGTATCGTTC TGCTTTTTTT ACGGCAGGAG ACTATTCTTG ATAGCATTCA ACTTATAATT TCATCGGCGT TTACCGGTCA GGCAGCAATG GGCGGGTTTG CAGGAGCCGG TGTGAAAGAG GCGATGCGTT TCGGTATTGC CCGAGGTCTC TTTTCCAACG AGTCCGGGCT TGGCAGCGCT CCGATCGTTG CTGCGGCAGC CCAGACCAAA CATCCGGTAA AACAGGCGCT TATCTCCTCA ACCGGTACCT TCTGGGATAC GGTAGTGGTC TGTCTTGCGA CTGGAATTGT TGTTGTCAAT TCCGGTATGT GGCAAAGCGG GCTGAAAGGA GCTGAACTAA CCAGTGCCGC TTTCAACGAA GTTCCCTACA TCGGCAATGC TGTCTTGACC TTTGGCCTCC TCACCTTTGT TTTTTCCACC ATTCTTGGCT GGTCTTATTA TGGGGAAAAG GCAATAGAAT ACCTCTTTGG CAAAAAGCTC ATTATGCCCT ATCGCTGGGC ATGGGTTGCT GCCGTTATGG TTGGTTCTGT TGCTTCGCTG CAGATTGTCT GGACCTTTGC CGATATTGCC AATGGCCTTA TGGCGCTGCC CAACCTGGTT TCCCTGATTG TGCTCAGCCC GGTTGTTGCT GCAGAAACAA AGGACTATTT TTCTCGTCCG CAATAA
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Protein sequence | MATLEKVLDQ ISGYVWGVPL LVLLFGTHLF LTFRLGFIQK YTFRAIRMSF TRSSEGEGEI SHFGALVTAL AATIGTGNIV GVATAVAAGG PGAVLWMWLT GVFGIATKYA EAVLSVKYRT VAEDGTVSGG PMYVLEKAMK MKWLAVLFAL FTSVAAFGIG NMVQANSIAT MVQHNFHVST WITGVVLTVF TAVVIIGGIT SIAKVCEYLV PFMAFFYVAG CIVLLFLRQE TILDSIQLII SSAFTGQAAM GGFAGAGVKE AMRFGIARGL FSNESGLGSA PIVAAAAQTK HPVKQALISS TGTFWDTVVV CLATGIVVVN SGMWQSGLKG AELTSAAFNE VPYIGNAVLT FGLLTFVFST ILGWSYYGEK AIEYLFGKKL IMPYRWAWVA AVMVGSVASL QIVWTFADIA NGLMALPNLV SLIVLSPVVA AETKDYFSRP Q
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