Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1569 |
Symbol | |
ID | 6463345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1659989 |
End bp | 1661521 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727790 |
Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
Protein accession | YP_002018430 |
Protein GI | 194336636 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACT TCAGGCACTC AATTCTTGCA CTCATTACCG AAACCTCGGC CAACCTGCCG AGTGATGTTC GCTGTGCACT CGCAGCCGCT ATTGACCGGG AAGATCCACT CTCCCAGGCA GGCCTTGCCA TGTCAACCAT TTCGGTCAAT ATCGACATGG CTGTCGATAA CATTTCACCG ATTTGCCAGG ATACCGGTAT GCCAACCTTT TTCATCCACA CTCCTCGCGG AACCGATCAA CTCTTTATGA AAGAGGAGAT TGAAGCGGCT ATTGCGGAAG CGGCCCGAAC CGGTAAACTC CGTCCCAATG CGGTCGATGC CATAAGTGGC AAGAACTCAG GCAACAACCT TGGCGAACAT TTTCCGGTAA TCCATTTTGA GCCCTGGGCA AAGGATGAGA TTGAGGTGAA GCTGATTCTG AAAGGTGGTG GTTGCGAAAA TAAAAACATT CAGTACTCAC TGCCGGAAGA AATTCCCGGA CTTGGAAGCG CTTCACGCGA CCTTGACGGC GTGCGCAAAT GCCTGCTTCA TGCGGTTTAT CAGGCGCAGG GGCAGGGGTG CAGCCCCGGT GTTATCGGCG TTGGAATCGG TGGCGACCGT ACCAGCGGTT TTGACCTTGC CAAGAAGCAG CTCTTCCGCA CCATTGACGA CCGTAACCCC GACAGTGAAC TTGATGCTCT CGAACAGGAT ATTCTTGAGA AAGCCAATAC GATGGATATC GGCCCCATGG GTTTTGGCGG AAAAACCACC CTCTTTGGAT GCAAAATCGG CAAATCACAC CGCGTTCCGG CAAGCTTTTT TGTCTCCGTA GCCTACAACT GCTGGGCATA CCGCCGTCTT GGCGTGCTGC TTGATCCGGA GAGCGGCTCA ATCAAGAGCT GGCAGTACAG AGCTGCCGAT GAGATCAAAC GCATGGCCAA AGGCGAGGGA ATGGCGCTGA CCGGAAAAGA GGTTATCCTG CAGGCTCCAC TTACTGAAGA GCAGGTCAGA TCGCTCAAGG TTGGCGACGT GGTGCTTATT AACGGCGCCA TGCATACCGG TCGTGATGCC TTCCACCACT ATATCATGCA CCACGACCTG CCCGCCCATC TCGATACAAC AGGAGGAATT CTCTTCCATT GCGGACCGGT TATCATGAAA AATGAGGATG GCAGTTACCG CGTTACCGCT GCCGGGCCGA CCACCTCAAT CCGTGAAGAG CCTTTCCAGG CGGATGTCAT CAAAAAACTT GGACTGAGAG CAATTATCGG TAAAGGGGGG ATGGGCCCGA AAACCCTCAA GGGGTTGCAG GAACATGGAG CCGTCTATCT CAACGCCATC GGAGGCGCAG CACAGTATTA CGCCCGTTGC ATTGACCGGG TGACCGGAGT TGATTTTCTT GAAGAGATGG GCGTTCCCGA AGCGATGTGG CATCTGGAGG CAAGCTCCTT TCCGGCTATT GTTACCATGG ATGCACACGG CAACAGCCTG CACAGCATCG TCGAAGAAGA GTCGTTCCGT CAACTCGGCA CATTCGCTAC TGATGCCCAC TGA
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Protein sequence | MENFRHSILA LITETSANLP SDVRCALAAA IDREDPLSQA GLAMSTISVN IDMAVDNISP ICQDTGMPTF FIHTPRGTDQ LFMKEEIEAA IAEAARTGKL RPNAVDAISG KNSGNNLGEH FPVIHFEPWA KDEIEVKLIL KGGGCENKNI QYSLPEEIPG LGSASRDLDG VRKCLLHAVY QAQGQGCSPG VIGVGIGGDR TSGFDLAKKQ LFRTIDDRNP DSELDALEQD ILEKANTMDI GPMGFGGKTT LFGCKIGKSH RVPASFFVSV AYNCWAYRRL GVLLDPESGS IKSWQYRAAD EIKRMAKGEG MALTGKEVIL QAPLTEEQVR SLKVGDVVLI NGAMHTGRDA FHHYIMHHDL PAHLDTTGGI LFHCGPVIMK NEDGSYRVTA AGPTTSIREE PFQADVIKKL GLRAIIGKGG MGPKTLKGLQ EHGAVYLNAI GGAAQYYARC IDRVTGVDFL EEMGVPEAMW HLEASSFPAI VTMDAHGNSL HSIVEEESFR QLGTFATDAH
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