| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1550 |
|---|
| Symbol | |
|---|
| ID | 6463391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1635862 |
|---|
| End bp | 1638231 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642727776 |
|---|
| Product | Kojibiose phosphorylase |
|---|
| Protein accession | YP_002018416 |
|---|
| Protein GI | 194336622 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGTG GTTCTTTGCA GGAGGCTACG GATGACAGAT TGGTGGTTAA GGCGTTGCTT
GATCTTTCGG CGGAAGAGTG GCTGCTGAGG CGGAAGGGTT TTCGCAACAG TGAAAAGAGT
GTACAGGTTA ATGAGACGCT TTTGACCATC GGAAATGGTT ATCTCAATAT CCGGGGGAGT
CTTGAGGAGT TGCCTCCCGG AAATGCCGGT GGTATGTATG TGGGGGGGAT TTACGATAAA
TCTGAAGCTG ATGTGGAGGA GTTGGTTAAG TGTCCTATGT GGACTGATGT GTCGGTCTGG
AGTGATGGCT GTAAATTCTG TATGACTACT TGCAAGGTGC TCAGCCATGA GCAGATCCTT
GATATGAAGA AAGGGGTGCT GCATCGGAGT ACGACGCTTG TGAATCCTGC AGGCCAGATC
GTGCGGCTGG AAACGGCTCG CCTTGTTTTC ATGCATGATG TGCATCTGGG GTACATGATG
GTAACGGTAA CCCCGATCAA TTTTTCCGGC CCGATCCGGG TTCTCAGTGG TTTGAACGGT
GAGGTGTGCA ACAGGGGCTT TTTCCCCCGT GAAAAGCTCA AACATCTGCA GCTTGAGAGA
ATCGAGCGTG GCCGGGCTTT GATGTATATC GAAATGAAAA CCAGAGAGCG GGGTATACGG
ATTGCTGAAG CGGCTTCATG GAAGCTTGTT TCTCCTTTTA TGCAGAGTTT TGCCTGGGAA
CCGAGGATTT ATGGTGAGAA GTTCACCAGC GAAATAAGCC TTGAGGCCCG TCAGGGTGAG
AGCTATGTTT TTGAGAAATT GGTTGTTGTT GCTACAAGCA GGGAGTTTGT GGCTGAAGAG
ATGTTCAAGG GTACAATCTG CAAATTGAAA TCCTTTGTTC GCACTGGAGT GGTTCCTGAA
ATAACGGCTC ATCTGAAGGC ATGGAATGAA AAATGGAAGC AGGCGGACAT TGTTCTTATA
GGGGATGAGA AGGCTCAGCA TGCAGTGCGT TTCAATGTCT ATCAGTTGCT GATCAATGCG
CCTTCCCGCC CTGCCGGTAT TGGAGCAAAA TTTCTGAGTT CCGAGGGTTA TCTGGGTCAT
GTTTTCTGGG ATACCGAGAT TTTTATTCTT CCGTTCTATG TCTACAATTT TCCTGATGTT
GCCCGGAATA TGCTGTTATA CCGTTACAAT ACTCTCGACG GGGCAAAGAA GAATGCGCTG
AAAATGGGCT GTAAAGGGGC GAAGTATGCA TGGGAGTCAG CAACGACCGG AGAGGATGTT
ACTCCGAGGT TTGCTTCAAA ACTTGAGCGA ACCATTCGGT TGATTTATAC CGGCACAGAG
GAGGATCATA TTGTTTCTGA TGTGATCTAT GGTGTTGAAA AGTATTTTCG TGTCACTGGT
GATGACAGTT TTCTTGTGGA TTATGGATTT GAGATGGTCT TTCTTACGGC GAGATTCTGG
GCATCGAGGG TTGTTGAGGA GGGCGATCAT TATGAAATTC GTTGTGTCAT TGGCCCTGAC
GAGTTTCATG AGCATGTCAA CAATAATGCC TATACGAATT TTATGGTGAA ATGGCATCTC
GGGCTTGCTG TGCTGCTTTT CAAGTATATG GGCAGGAGCT ATTCGGGAAT TCTGGATGAT
CTTGTCGCCA AAATAGGGCT TGAGAGGGAG GAGGTGGATG TATGGCTGGC TATCAGCAGG
AAACTCAGGC TCACCTATGA TCCCCAAACA AGGCTTTTTG AGCAGTTTGA CGGCTACTTT
TCCCTGAAAG ATTATCTCGT TGAGAAGTTT GACCGCAAGG GTCATCCTGT GCTTCCCGAG
GGGATTGATT ACAGCAATAT ACAGTCGACA CGGTTGATCA AGCAGGCTGA TGTTCTCATC
ATGATGATGC TCTTTCCCCA TTCTTTCAGT GATGAGGATA AAAGAGCCAA TTTTGATTTT
TATGAGAAAC GTACGGCGCA TGCATCGTCA CTGAGTCACT GTATTCATGC CATGATGGGC
CTCTCTGTCG GGATGCGCAC AAGGGCCTAT CACTATTTTA TGAAGACGGC GCTTTTTGAT
CTGGAGAATC TTCATGAAAA CACGGCGCTG GGGATTCATG CGGCTGCGGT TGGCGGTACA
TGGCAGACGG TGATCTCGGG TTTCGGAGGT TTTTCGATAA AGTCTGACCG GATGGTGTTG
AAACCGTGGC TGCCGAAAAA ATGGGAAAGC CTTTCGTTTT GTGTACAGTG GAGGGCAAGA
ACCGTTGAAA TTACCATTTT CCATGACAGG GTTGCATTGC TCGTCATTTC TGATGAAAAG
CTGTTACTGC CTGTTACGCT CTACGAGAAA ACCTGGAAGA TTATGACGAA CAAGCGATAT
GAACTTCCCT ATTGTGTCGT GAAACGCTGA
|
|---|
| Protein sequence | MVSGSLQEAT DDRLVVKALL DLSAEEWLLR RKGFRNSEKS VQVNETLLTI GNGYLNIRGS
LEELPPGNAG GMYVGGIYDK SEADVEELVK CPMWTDVSVW SDGCKFCMTT CKVLSHEQIL
DMKKGVLHRS TTLVNPAGQI VRLETARLVF MHDVHLGYMM VTVTPINFSG PIRVLSGLNG
EVCNRGFFPR EKLKHLQLER IERGRALMYI EMKTRERGIR IAEAASWKLV SPFMQSFAWE
PRIYGEKFTS EISLEARQGE SYVFEKLVVV ATSREFVAEE MFKGTICKLK SFVRTGVVPE
ITAHLKAWNE KWKQADIVLI GDEKAQHAVR FNVYQLLINA PSRPAGIGAK FLSSEGYLGH
VFWDTEIFIL PFYVYNFPDV ARNMLLYRYN TLDGAKKNAL KMGCKGAKYA WESATTGEDV
TPRFASKLER TIRLIYTGTE EDHIVSDVIY GVEKYFRVTG DDSFLVDYGF EMVFLTARFW
ASRVVEEGDH YEIRCVIGPD EFHEHVNNNA YTNFMVKWHL GLAVLLFKYM GRSYSGILDD
LVAKIGLERE EVDVWLAISR KLRLTYDPQT RLFEQFDGYF SLKDYLVEKF DRKGHPVLPE
GIDYSNIQST RLIKQADVLI MMMLFPHSFS DEDKRANFDF YEKRTAHASS LSHCIHAMMG
LSVGMRTRAY HYFMKTALFD LENLHENTAL GIHAAAVGGT WQTVISGFGG FSIKSDRMVL
KPWLPKKWES LSFCVQWRAR TVEITIFHDR VALLVISDEK LLLPVTLYEK TWKIMTNKRY
ELPYCVVKR
|
|---|
| |