| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1546 |
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| Symbol | |
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| ID | 6463399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1629858 |
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| End bp | 1630202 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642727772 |
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| Product | thioredoxin |
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| Protein accession | YP_002018412 |
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| Protein GI | 194336618 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.350487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGTATA AAAAAATGAG TGGAAAATAT CTTGTGGCAA CCGACCTGAA TTTCAAAACA
GAGATTCTTG ATTCTGATAA AGTTGCGCTG GTTGATTTCT GGGCTGCCTG GTGTGGACCG
TGCATGATGC TTGGACCCGT TATTGAGGAG CTTGCCGGTG ATTTTGAGGG AAAGGCTGTC
ATTGCAAAAC TCAATGTTGA CGAGAATCCC AATACTGCTG CACAGTACGG AATCAGAAGC
ATTCCTTCCC TGCTTGTTTT TAAAAATGGA CAGGTTGTTG ATCAGATGCT TGGAGCTATG
CCGAAAAACA TCATTGCCAA GAAAATCGAC GAGCATATCG GTTGA
|
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| Protein sequence | MVYKKMSGKY LVATDLNFKT EILDSDKVAL VDFWAAWCGP CMMLGPVIEE LAGDFEGKAV
IAKLNVDENP NTAAQYGIRS IPSLLVFKNG QVVDQMLGAM PKNIIAKKID EHIG
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