Gene Ppha_1539 details

Gene Information

• Locus tag: Ppha_1539
• ID: 6463414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1621498
• End bp: 1622100
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642727765
• Product: Superoxide dismutase
• Protein accession: YP_002018405
• Protein GI: 194336611
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.172544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATATC AGCAACCAGC ACTTTTATAC GCAGAGAACG CACTGGAACC ATTTATTTCC 
GCAAAAACCC TTGGGTTTCA CTATGGCAAG CATCATGTTG CATACATCAC CAATTACAAC 
AACCTTGTCG CCGGTACACC TCTCGACACC ATGAGCCTTG AAGAGGTCAT AGCCCATAGC 
GCTGCCGACC CGCAGAAAGT CGGCATATTC AATAACGGCG CACAAGCCTG GAACCACTCC 
TTCTACTGGA ACTGCCTGAC ACCCAACGGT GGCGGGGAAC CCTCCGGAGA ACTTGGAGCA 
AAAATTACAG AAGATTTCGG CAGCTTCGAC AAATTCAAAG AAGAGCTTAA AAGCGCAGCC 
GCAACTCAAT TTGGCAGTGG ATGGGCATGG CTCGTCCTTG ATGGAACAAC GCTGAAGGTA 
GTAAAAACCG CCAATGCACA AACACCTTCA ACCAGCGGTC AAAAACCGAT CCTCACCATT 
GACGTCTGGG AGCACGCATA CTACCTCGAT TATCAGAACC GCCGCCCCGA CTATGTCGCA 
ACCGTGATCG ACAACCTGCT CAACTGGGAA TTTGCTGCTG AAAATTTCCG CGCTGCACAG 
TAA 

 

Protein sequence

MAYQQPALLY AENALEPFIS AKTLGFHYGK HHVAYITNYN NLVAGTPLDT MSLEEVIAHS 
AADPQKVGIF NNGAQAWNHS FYWNCLTPNG GGEPSGELGA KITEDFGSFD KFKEELKSAA 
ATQFGSGWAW LVLDGTTLKV VKTANAQTPS TSGQKPILTI DVWEHAYYLD YQNRRPDYVA 
TVIDNLLNWE FAAENFRAAQ