| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1521 |
|---|
| Symbol | |
|---|
| ID | 6463461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1602800 |
|---|
| End bp | 1603987 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642727747 |
|---|
| Product | arsenite-activated ATPase ArsA |
|---|
| Protein accession | YP_002018387 |
|---|
| Protein GI | 194336593 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0003] Oxyanion-translocating ATPase |
|---|
| TIGRFAM ID | [TIGR00345] arsenite-activated ATPase (arsA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00129827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATA TCATTTTTAC CGGAAAAGGT GGTGTTGGTA AGACCTCTGT AGCAGCCGCA
ACAGCGCTTA AGGCAGCAGA TATGGGGTAC AAGACCCTCA TTATGTCTAC CGATCCGGCC
CACAGTCTGG GTGACTCGCT CGATGTTAAG TTAGGACCTT CGCCAGTAAA AGTTGCTGAA
AATCTTTGGG GTCAGGAAGT CAGCGTTTTT GGTGATCTCA ATCTGAACTG GGATGTAGTC
AGGGAGCACT TCGCTCATTT GATGGAATCT CGTGGAATTG AGGGGGTTTA TGCTGAGGAG
ATGGGTGTGC TTCCAGGTAT GGAAGAGCTC TTTTCCCTCT CGTATATTAA ACGTTACAAT
GAGCAGCAGG AGTATGATCT TCTTGTTGTT GATTGCGCAC CAACCGGTGA AACACTTCGT
CTGCTCTCCC TGCCTGAAAC ATTTGGATGG TTTATCAAGC TTATCCGTAA TGTCGAAAAA
TTTATGGTAA AGCCGGTTCT CAGGCCGCTT TCGAAGAAAA TCAAGAAAAT GGACGATTTT
GTGGCTCCAG TGGAAGTTTA TGATAAGGTT GACAATCTTT TTTCTTCTAC GGAAGGGATT
ATTGATTTGT TGGCCGACAG TTCAAAAACG ACCATGCGGC TTGTCATGAA TCCTGAAAAG
ATGGTGATCA AGGAGTCTAT GCGTGCCTTG ACCTATCTTA ATCTTTACGG CATTACGGTT
GACCGCATTA CGATTAACCG CGTTATGCCA GATCAGAGTC CCGATCCTTA TTTCCAGAAG
TGGCGTGCTA TTCAGCAGAA GTACATTGAT CAGATCAGTG AGGCTTTTGC ACCAATACCG
ATCACCGAAG TACCTTTGTT TGATGATGAG GTTGTTGGTC TTCCGATGCT TCGCAGGGTA
GGTGAGAAAG TTTATGGTGA CCTGAATCCT CTCGATGTCT TCTTCAACGA GAACCCTATT
GATATCAAGA AGGTTTCTGA TGGTCATTAC AAGGTTCGCG TCAGATTGCC TTTTATGGAA
AACATGGGAC TGGAGCCAAA AATCCTCAAA CTTGGCGACG ATCTTACTAT CCGTATTGGT
GATTACCAGA AAATTGTTGC CCTTCCGATT TTTCTTGCCG GCATGGAGTC AACAGGCGCC
TCTTATGAAG ACAAGTGGCT GAGTGTTGAT TTCGAAAAGG CGAAATAA
|
|---|
| Protein sequence | MRNIIFTGKG GVGKTSVAAA TALKAADMGY KTLIMSTDPA HSLGDSLDVK LGPSPVKVAE
NLWGQEVSVF GDLNLNWDVV REHFAHLMES RGIEGVYAEE MGVLPGMEEL FSLSYIKRYN
EQQEYDLLVV DCAPTGETLR LLSLPETFGW FIKLIRNVEK FMVKPVLRPL SKKIKKMDDF
VAPVEVYDKV DNLFSSTEGI IDLLADSSKT TMRLVMNPEK MVIKESMRAL TYLNLYGITV
DRITINRVMP DQSPDPYFQK WRAIQQKYID QISEAFAPIP ITEVPLFDDE VVGLPMLRRV
GEKVYGDLNP LDVFFNENPI DIKKVSDGHY KVRVRLPFME NMGLEPKILK LGDDLTIRIG
DYQKIVALPI FLAGMESTGA SYEDKWLSVD FEKAK
|
|---|
| |