Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1517 |
Symbol | |
ID | 6463470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1597859 |
End bp | 1598521 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727743 |
Product | hypothetical protein |
Protein accession | YP_002018383 |
Protein GI | 194336589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.167395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG CAGTAAAATT ATTAAGCCTC GCAGTAGCAC TTTTTGCTGG ACTCGGCAAT ACCGCCCAGG CAGCAGGATT TAAAATCGGC GCAGACGTCG TCAGCAGTTA CGTCTTTAGA GGTACCGAAT TTGGTAATTC AGTAGCCATT CAGCCAGCCC TTTCCTACAC CTGCCCGACA ACCGGTATTA TTGTTGGCGC ATGGGGTTCC TATGCTGTCA GTGAAGATGC GGGCAACAGA CACAAGGAGA TTGATCTTTA TGCAACGCTG CCGGTAGGTC CACTCAGCTT CACTGTAACC GATTATAATT CACCTGATGG CGGCGATTCA TTTGATTTCA GTGATGATGG TTCCAACGTG GTTGAACTCA GCGTTGGCTA TACAAAAGAC AATCTCAGCC TTCTGGCCGC AATCAACGTC GCTGGACTTG ATACCGATAA TGCAAAATAC TGCGAAGCCG GCTACAAGTT CTACGACAAG GATGGCTATA CGGCAAAAGG CGTTGTGGGA TTAGGTGATG AAGATTTCTA TGGCGATGGT GATGGAGACA ATATCGCTCT TGTCAACACC GGTATATCGG TTTCCAAAGA CCGCTTCACT GCATCGTACA TCTACAACCC TGACACCGCT AAATCAAACC TTGTCTTTAT GGCATCGTTC TGA
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Protein sequence | MKKAVKLLSL AVALFAGLGN TAQAAGFKIG ADVVSSYVFR GTEFGNSVAI QPALSYTCPT TGIIVGAWGS YAVSEDAGNR HKEIDLYATL PVGPLSFTVT DYNSPDGGDS FDFSDDGSNV VELSVGYTKD NLSLLAAINV AGLDTDNAKY CEAGYKFYDK DGYTAKGVVG LGDEDFYGDG DGDNIALVNT GISVSKDRFT ASYIYNPDTA KSNLVFMASF
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