Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1515 |
Symbol | pgi |
ID | 6463474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1595450 |
End bp | 1597138 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727741 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_002018381 |
Protein GI | 194336587 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.447812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTCTGT CACGAAGCGA AGTCTGGAAT GCTCTTTTAT TACACAAGCA GGAGATTGAA ACACTTCATA TGCGGGAGAT GTTTCAGGAC GGTGGTAATC GTTTTGAACA ATTTTCTCTT CAGTGGGGCG AACTGATGCT TGACTATTCA AAAAACAGGA TCACTTCTCG TACGATGGAA CTGCTTCTGG ATCTTGCCCG CAGTGTTGAG CTTGAAAAAA GACGTGATGA GATGTTTGAT GGCGCTCCAA TCAATCGCAC CGAAAACCGT GCAGTGCTCC ATACTGCTCT TCGCAGACCA CCAGGATATT CGCTTGTTGT TGACGGTCTC GATCTTTCAA CAGAAATTGC TGATGTGCTC GTTCAGATGA AGGATTGTTG TGAGAGGGTT ATTTCTGGCT CGTGGAAGGG GTATACCGGA AAGCGTATGA CCGACGTGGT CAATATCGGT ATCGGTGGCT CTGACCTCGG CCCCTGTATG GTAACCGAAG CGCTCCGTCC TTTTGCACAT GGCCATCTTC AGGTGCATTT TGTCTCCAAT ATTGATGGAA CCCATATCAG TGAGACGCTG AAAAAGCTCA ATCCGGAAAC GACGCTCTTC ATTATTGCCT CAAAAACATT TACGACCCAG GAGACGCTTA CCAATGCCAT GAGCGCCCGT GCATGGTTTT TGACTCATGC TGTCGAGAGA TCACATATTG CAAAGCACTT TGTGGCGGTT TCAACCAACC GTTCAAAGGT GGTGGAGTTC GGTATTGATG ATGCGAACAT GTTCAGGTTC TGGGATTGGG TTGGCGGGCG TTATTCTCTC TGGTCTTCAA TAGGGCTTTC AATAGCACTT TTTCTCGGTT TTGACCGTTT TCAGGAGCTC CTCAATGGAG CCTGTGCGAT GGATGAGCAT TTCCGTCAGT CGCCTCTTGA AGGCAATATC CCGATTCTCC TTGCTTTGCT TGGAGTCTGG TACAATAATT TTTTCGATGT CTCATCTCAC GCAGTTATTC CCTACGACCA GTATCTGCAC CGCTTTCCAG CCTATCTGCA GCAGCTTGAT ATGGAAAGTA ATGGCAAGAG GGTTGATCTT GCTGGCAACA TGGTTGAGTA TGCAACCGGT CCGGTGATCT GGGGTGAACC AGGCACGAAT TCACAGCACG CATTTTTTCA GTTGCTCCAT CAGAGCCCCA ATTTTATTCC GGCAGATTTT ATTGTGCCGC TTAAAACCCA AAACCCGATA GGGGAGCATC ATGATATCCT TCTTGCAAAC TGTTTTGCAC AGACCGAAGC GCTCATGAGA GGCAAAAATG AGCAGGAGGT GCGTCAGGAA CTCGATGCGG CTGGATGTGA TGATTCCGAA ATGAACATGC TGTTGCCGCA TAAGGTTTTT CCTGGAAATC GTCCGACAAA TACGATTCTG CTCAAGGAAC TCAATCCTTA TTCCCTTGGT GCTCTCATCG CCATGTATGA GCATAAGGTT TTTGTGCAGG GGATTATCTG GGGTGTCAAC TCTTTTGACC AGTGGGGTGT CGAACTTGGC AAACAGCTTG CCAAGGCTAT TTTCCCTGAA ATTCAGGGGA GTGAAACCAT CTCCTGCCAC GACAGTTCGA CCAACGCTCT TATCAATGCC TATCGTGACT TCAAGGTGAG TGATAGCCAA TCGGTAAGTT CACAACTCTC ATTTTTTGAT CCTGAGTAA
|
Protein sequence | MGLSRSEVWN ALLLHKQEIE TLHMREMFQD GGNRFEQFSL QWGELMLDYS KNRITSRTME LLLDLARSVE LEKRRDEMFD GAPINRTENR AVLHTALRRP PGYSLVVDGL DLSTEIADVL VQMKDCCERV ISGSWKGYTG KRMTDVVNIG IGGSDLGPCM VTEALRPFAH GHLQVHFVSN IDGTHISETL KKLNPETTLF IIASKTFTTQ ETLTNAMSAR AWFLTHAVER SHIAKHFVAV STNRSKVVEF GIDDANMFRF WDWVGGRYSL WSSIGLSIAL FLGFDRFQEL LNGACAMDEH FRQSPLEGNI PILLALLGVW YNNFFDVSSH AVIPYDQYLH RFPAYLQQLD MESNGKRVDL AGNMVEYATG PVIWGEPGTN SQHAFFQLLH QSPNFIPADF IVPLKTQNPI GEHHDILLAN CFAQTEALMR GKNEQEVRQE LDAAGCDDSE MNMLLPHKVF PGNRPTNTIL LKELNPYSLG ALIAMYEHKV FVQGIIWGVN SFDQWGVELG KQLAKAIFPE IQGSETISCH DSSTNALINA YRDFKVSDSQ SVSSQLSFFD PE
|
| |