Gene Ppha_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1484 
Symbol 
ID6463512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1564390 
End bp1565103 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content45% 
IMG OID642727711 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_002018351 
Protein GI194336557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.51038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACGG TAGCAATTAT TCCTGCAAGA GGCGGGTCGA AAGGGCTTAA AGAGAAGAAT 
ATTTATCCTG TGGCAGGAAA ACCACTGCTT GCATGGACCA TTTTGCAGGC ATCAGCCTCG
ACAAGTGTTG AAAAGGTTTT TGTTACAACT GATGACAAGG CTATTGCTGA TGTAGCACAC
GCATACGGAG CAGAGGTGAT TGTGCGTCCG TCGGAACTTG CGGGCGACAA GGCAAGTTCT
GAATCGGCCA TTATGCATGC GCTCTCTGTT ATTGAACGGG AGTACAACAT GCCGCTCGAG
ATGATTGTAT TTTTACAGGC AACCTCACCC TTGCGCAAAC CTGATGATAT TGATCGGGCA
GTAGCACTTT TTTGTCAGGA AGGGGCCGAT TCGCTGATTT CGGTCACCAG AGCTGATGAT
CTTACCCTGT GGGAATCAAG GGCGGGAAAA TGGGAAAGTG TCAATTTCGA TTACCGCAAT
CGAGGTATGC GACAGGATCG TCCAACACAG TTTATTGAAA ATGGTTCAAT CTATCTTTTC
AAGCCGGAGA TTCTTGCCGC CTTTGGCAAC AGAATCGGTA AAAAGCTCTC TGTCTATGAA
ATGGAGTTTT GGCAAACATG GGAGATTGAT ACTATCAAGG AAATAGATTT AATTGAATAT
TACCTGTATA AAAAAAACCT GGCAGGCCGG GATGTAGCTC CACAGAACTA TTAG
 
Protein sequence
MHTVAIIPAR GGSKGLKEKN IYPVAGKPLL AWTILQASAS TSVEKVFVTT DDKAIADVAH 
AYGAEVIVRP SELAGDKASS ESAIMHALSV IEREYNMPLE MIVFLQATSP LRKPDDIDRA
VALFCQEGAD SLISVTRADD LTLWESRAGK WESVNFDYRN RGMRQDRPTQ FIENGSIYLF
KPEILAAFGN RIGKKLSVYE MEFWQTWEID TIKEIDLIEY YLYKKNLAGR DVAPQNY