| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1474 |
|---|
| Symbol | |
|---|
| ID | 6463527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1556738 |
|---|
| End bp | 1557799 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642727701 |
|---|
| Product | permease |
|---|
| Protein accession | YP_002018342 |
|---|
| Protein GI | 194336548 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.614025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA TGGGACAACA ATCACGCAAA GCGCTTCGTA TGGAAAGCGT GAAATGGATT
TCCGCTGTTT TTGTTGCAGG AGGGCTATGG TTCCTGGTTT ACAACAATCT TGAATGGTTT
GCCGCCCTCT CTCTTCAGTT TGTCGGAATT ACCCGGACAA GCAGTTTTGG TGAGGCGCTC
TTCTTTTTCA TCTATGAGGT GCCGAAAGTC CTTCTGCTGC TCACCGCTGT GGTGTTTCTG
ATGGGGGTTG TGCATACTTT TATCTCTGCC GAGCGGACGC GGGCCCTTCT TTCAGGTCGT
CGTATCGGTG TCGGCAACAT TATGGCGGCA AGTCTCGGCA TTGTGACACC CTTCTGCTCC
TGCTCGGCGG TACCGCTTTT CATTGGCTTT TTGCAGGCAG GGGTACCACT TGGTGTTACC
TTTTCCTTCC TTATTTCAGC GCCAATGATC AATGAGGTTG CCCTTGCATT ACTTTTCGGC
ATGTTCGGCT GGAAAGTTGC CCTCCTCTAT ATGGGGATGG GACTCATGAT TGCAATTGTT
GCCGGACTGG TGATCGGCAA GCTCAAGATG GAGCGCTATC TGGAAGAGTG GGTGCAGAAA
CTGCAGCAGA GTCAGGTTTC TGCCGAAGCG GAGGGAGAGG TGATAAGCTG GCCATTGCGC
CTGAAGGAAG GAGTCAGCCA TGTTCGAGAG ATTGTTGGCA AAGTCTGGCT TTATATCGTA
CTCGGTGTTG GGCTTGGCGC TGGAATCCAT GGCTATGTAC CGGAAAACTT TATGGCTTCA
CTGATGGGAA AAAGTGTCTG GTGGTCGGTT CCCGTTGCGG TACTGATTGG CGTTCCCATG
TATTCCAACG CAGCAGGTAT TCTTCCCGTT GTTCAGGCGC TGCTCGGCAA AGGGGCGGCA
CTTGGCACGG TAATGGCCTT CATGATGAGC GTCATAGCCC TTTCTGCCCC GGAGATGATC
ATTCTCCGCA AAGTGCTCAA GCCTCAGCTT ATCGCCGTGT TTGCTGGCGT TGTGGCTGTA
GGGATCATGA TCGTCGGTTT TGTCTTTAAT CTTGTTTTGT GA
|
|---|
| Protein sequence | MESMGQQSRK ALRMESVKWI SAVFVAGGLW FLVYNNLEWF AALSLQFVGI TRTSSFGEAL
FFFIYEVPKV LLLLTAVVFL MGVVHTFISA ERTRALLSGR RIGVGNIMAA SLGIVTPFCS
CSAVPLFIGF LQAGVPLGVT FSFLISAPMI NEVALALLFG MFGWKVALLY MGMGLMIAIV
AGLVIGKLKM ERYLEEWVQK LQQSQVSAEA EGEVISWPLR LKEGVSHVRE IVGKVWLYIV
LGVGLGAGIH GYVPENFMAS LMGKSVWWSV PVAVLIGVPM YSNAAGILPV VQALLGKGAA
LGTVMAFMMS VIALSAPEMI ILRKVLKPQL IAVFAGVVAV GIMIVGFVFN LVL
|
|---|
| |