| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1437 |
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| Symbol | |
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| ID | 6463576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1515046 |
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| End bp | 1515687 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727670 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_002018311 |
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| Protein GI | 194336517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000111508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATACA AACTTCTTGT TTTTGATTTT GACGGGACCC TGGCTGATAG CGAGGCGAGC
ATTATGGAGT CTCTGCAGCT TGTCGCCCAA GATCTGGGAA TTCCGGCTTT TGACAGGGAC
GGAGCCCGGC GAAGTATCGG TTTGCCGTTG CGGCGTACAA TTGAAATGGG GCTTGGTCTC
GCTCCTGAAG AAGCTCCTGA GGCAGTTGAC CTTTACAGAA AGCGTTACAA CGAGGTTGCT
TTAGACTTGA CGCATCTGTT TCCGGGAGTG AACGAGACCC TTGACCGATT GCGGCACGAT
TACCTGCTGG CTGTCGCTTC AAGCAAGAGC ACCCAAGGGC TGTTGTTGAT GATGCGGCAT
CTCGGGATTT ATGAGATATT CTCCTTTATT TCCGGGGCTC AGGATGTGCA AGAGCCAAAG
CCGGCACCCG ATATGGTGCT GCTTGCACTG GAGTCCATGA ATATTCCGGC TCAAGAGTGC
CTTGTTGTTG GCGACACTGT TTACGATATC GAAATGGGTC AACGCGCATT CACCGATACC
TGTGCCGTCA CCTACGGCAA CCATTCAGCC GATGAACTCC GCTGCTTCAA CCCCACATTT
ATCATTAACG CATTCCCGCA TCTCATGCAT TGTTTGGAGT GA
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| Protein sequence | MKYKLLVFDF DGTLADSEAS IMESLQLVAQ DLGIPAFDRD GARRSIGLPL RRTIEMGLGL
APEEAPEAVD LYRKRYNEVA LDLTHLFPGV NETLDRLRHD YLLAVASSKS TQGLLLMMRH
LGIYEIFSFI SGAQDVQEPK PAPDMVLLAL ESMNIPAQEC LVVGDTVYDI EMGQRAFTDT
CAVTYGNHSA DELRCFNPTF IINAFPHLMH CLE
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