| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1425 |
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| Symbol | |
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| ID | 6463586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1493382 |
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| End bp | 1495595 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727659 |
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| Product | helicase, RecD/TraA family |
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| Protein accession | YP_002018300 |
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| Protein GI | 194336506 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATA ATAGTTCGTC GTCTCACCAA AGCATTTCTC ACAACACTAT TTCTGGCGGC
CCCTTGACTG AACGGCTCTC TGGTTCGGTT GAGCGGGTCA CCTTTCACAG CGAAGAGTCC
GGCTTCTGCA TCCTGCGGAC AAAGGTAAAA GGGCGTCGTG ACCTGGTCAC TGTTGTTGGT
TCGGCAGCTT CCATTACTCC CGGTGAATAT GTCGAATGCC TTGGAAACTG GCAAAATGAC
CGTACCTATG GATTGCAGTT CAGGGCAACC CGGTTGACTG TTGTGCCGCC AAGCACCCTG
GAAGGAATCG AAAAATACCT TGGCTCCGGC ATGGTCAAGG GAATTGGCCC ACACTTTGCC
AAAGCATTGG TCTACGCCTT TAAAGAGGAG GTCTTTACCG TTATTGAGGA AGAACCGGAG
CGTATGCTTG AGCTTCCCGG TATTGGCCAG AAAAGGATGA CAAAGGTGGC TGCTGCCTGG
GCAGACCAGA AGGTGATCAG AGAGATCATG GTCTTTCTTC AGTCGCACGG ACTCGGAACT
GGCCGCGCGG TCAGGATCTT CAAGACCTAC GGCAACGAGT CGATTATCAA GGTGACCGAA
AATCCCTATC GCCTTGCCCT CGACATCCAC GGCATAGGTT TCACGACTGC CGACACTCTT
GCCATGCAGC TTGGCATTGC GCCCGACTCC CTTATTCGTG CGCAAGCAGG CGTTCGACAT
ATCCTGCAAG AGATCTCCGG AAACGGCCAT TGTGCAGCCC CATGGGAGGT GCTTGTAGCT
GAAGCGGCCA AACTGCTTGA AATTACACCG ACGATCATCG AAACAGCGAT CAATGCAGAA
GTTGCTGCAG AAAACCTTGT CCGTGAAGAG ATAAACGGCA CTCCCGCACT CTTTCTGACA
CCCCTTTACC GGGCCGAAAT CGGCACTGCA ACCCATATCC AGAGGCTGCT CCGTGGAGAG
CTGCCCTGGG GATCGATTGA CACCGACAAG GCAATTCCCT GGGTAGAAGG GAAGAGCGGA
CTTACCCTCT CCGACTCACA ACAGCGAGCC ATCAGCCTTG CCCTTTCAAA CAAGGCTGTG
ATCATTACCG GTGGACCGGG GGTAGGAAAA ACAACCCTCG TCAACAGCAT TCTGCTCATA
CTTCAGGCAA AAAAGCTTAC CGTTACCCTC TGCGCACCAA CCGGAAGGGC GGCCAAACGA
CTCTCCGAAT CAACCGCTCT TGAAGCCAAA ACCATTCACC GCCTGCTGGA GTTCGATCCC
CAGTCATTCG GATTCAAACG CAACCGCGAC AACCCGCTCG AAACCGACCT CGTCGTGATC
GACGAAGCCT CCATGGTTGA CATCGTACTC ATGAACCGCC TCCTCGCCGC CATTCCCGAC
AAAGCCGCCC TGATGCTGGT TGGAGATGTC GACCAGCTTC CATCCGTTGG CCCGGGCGCT
GTACTTGCCG ACCTTATCCG CTCCGGCAGC ATACCCGTAA TCAGCCTGAC CGAAATATTC
CGCCAAGCCG CATCCTCACG TATCATCATC AATGCCCACC GGATCAATCG CGGAGAGATA
CCGCTCAACC TTGAGGGCCC CGGCCTCTCC GACTTCTACT TTATCCCTGC CTCATCTCCC
GAAGAGATCT ACAACAAACT CATCCAGCTC ATCACCGAGC GCATACCGAA ACGGTTCGGC
CTCCATTCGG TGAAGGAGGT TCAGGTGCTG ACTCCGATGA ACAGGGGAGG GCTCGGTGCC
CGTGCACTTA ATGTTGAACT GCAACGAGCG CTCAACGACA AAGCTGAACC GAAAATAACC
CGATTCGGCA CAATCTTTGC TCCCGGTGAC AAGGTGATCC AGACCGTCAA CAACTACGAC
AAAGAGGTCT TCAACGGCGA CATTGGCCAG ATCCTCAAAA TTGACACCGA AGAGAGCATC
CTGCTGGTCG ACTACGATGG CCGGGAGGTA GAATATGAGT TTGGCGAACT CGATGAAGTT
TCACTTGCCT ATGCAACGAG TATCCACAAA AGCCAGGGAT CAGAATACCC GGCAGTCATC
ATCCCCCTTG CCATGCAGCA CTACACCCTG CTGGAGCGGA ATTTGATCTA CACCGCCGTT
ACCCGTGGCA AAAAGCTGGT CATCATCATC GGAGAACCCA AAGCCCTCGG CATAGCCGTC
AAGACCCAGA AATCAAACAG CAGGGTAACA AATTTGACAG CACGGATTGC CTGA
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| Protein sequence | MTNNSSSSHQ SISHNTISGG PLTERLSGSV ERVTFHSEES GFCILRTKVK GRRDLVTVVG
SAASITPGEY VECLGNWQND RTYGLQFRAT RLTVVPPSTL EGIEKYLGSG MVKGIGPHFA
KALVYAFKEE VFTVIEEEPE RMLELPGIGQ KRMTKVAAAW ADQKVIREIM VFLQSHGLGT
GRAVRIFKTY GNESIIKVTE NPYRLALDIH GIGFTTADTL AMQLGIAPDS LIRAQAGVRH
ILQEISGNGH CAAPWEVLVA EAAKLLEITP TIIETAINAE VAAENLVREE INGTPALFLT
PLYRAEIGTA THIQRLLRGE LPWGSIDTDK AIPWVEGKSG LTLSDSQQRA ISLALSNKAV
IITGGPGVGK TTLVNSILLI LQAKKLTVTL CAPTGRAAKR LSESTALEAK TIHRLLEFDP
QSFGFKRNRD NPLETDLVVI DEASMVDIVL MNRLLAAIPD KAALMLVGDV DQLPSVGPGA
VLADLIRSGS IPVISLTEIF RQAASSRIII NAHRINRGEI PLNLEGPGLS DFYFIPASSP
EEIYNKLIQL ITERIPKRFG LHSVKEVQVL TPMNRGGLGA RALNVELQRA LNDKAEPKIT
RFGTIFAPGD KVIQTVNNYD KEVFNGDIGQ ILKIDTEESI LLVDYDGREV EYEFGELDEV
SLAYATSIHK SQGSEYPAVI IPLAMQHYTL LERNLIYTAV TRGKKLVIII GEPKALGIAV
KTQKSNSRVT NLTARIA
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