| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1378 |
|---|
| Symbol | |
|---|
| ID | 6463650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1441966 |
|---|
| End bp | 1443168 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642727617 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_002018258 |
|---|
| Protein GI | 194336464 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG AAAAAATTGC AATAGCCTAT TCCGGTGGAC TCGATACCTC CATCATGATC
AAATGGCTGA AAGACAAATA TGATGCTGAA ATCGTTGCCG TCACCGGCAA TCTCGGCCAG
CAGAAAGAGA TCGAAAACCT TGAATCAAAA GCAATCGCCA CAGGAGCCTC AAAATTCCAG
TTTCTTGACC TGCGCAAGGA GTTTGTTGAA GAGTACATCT GGCGTGCGCT CAAGGCCGGA
GCCCTCTATG AAGATGTCTA CCCGCTTGCT ACCGCACTTG GACGCCCCCT GCTTGCAAAA
GCGATTGTCG ATACCGCCCT CGCCGAAGGA TGCACCATGC TCGCCCACGG CTGCACAGGA
AAAGGAAACG ACCAGGTACG CTTTGAAGTG ACCTTTGCCT CACTTGCCCC CCACCTCAAG
GTACTTGCTC CCCTGCGTGA ATGGGAGTTC ACCTCAAGGG AATCGGAAAT TGCCTACGCC
CTTGAGCACA ACATCCAGGT CTCTGCTACC AAGAAAAACC CCTACTCCAT TGACGAGAAC
ATCTGGGGAA TCAGCATCGA ATGCGGCGTG CTTGAAGATC CGATGGTTGC CCCTCCCGAA
GATGCCTACC AGATCACCAC ATCACCGGAA AATGCGCCAA ACACTCCGGC AGTTGTTGAA
ATCGAATTTG AAAAAGGTAT TCCCGTCTCC CTTGACGGCA AAAAGATGAG CGGCCTTGAC
CTCATTATCC GCCTCAACGA GATCGGCGCA GCCAATGGCG TCGGACGCCT CGACATGATC
GAAAACCGTG TTGTCGGCAT CAAGTCACGT GAAATCTACG AAGCCCCGGC AGCAACCATC
CTGCACTTCG CACATCGCGA ACTCGAACGC CTTACACTCG AAAAATCGGT CTTCCAGTAC
AAAAAGAACA TCAGCCAGGA CTACGCAAAC ATCATCTATA ACGGACTCTG GTTCTCGCCG
ATGAGAAAAG CGCTCGATGC CTTTGTGGAT GAAACACAGA ATCCGGTGAC CGGTCTTGTC
CGCCTGAAGC TCTACAAGGG TGGAGTCTCC CTGCTGGGTC GCAACTCACC TTACTCGCTC
TACAACGAGG AGCTTGCCAC CTACACCGAA TCCGACACCT TCAACCACAA GGCTGCAGCA
GGCTTTATCC ACCTCTATGG ACTTGGGCTG AAAACCTACA GCGAAGTACA CACCGCCAAA
TAA
|
|---|
| Protein sequence | MSKEKIAIAY SGGLDTSIMI KWLKDKYDAE IVAVTGNLGQ QKEIENLESK AIATGASKFQ
FLDLRKEFVE EYIWRALKAG ALYEDVYPLA TALGRPLLAK AIVDTALAEG CTMLAHGCTG
KGNDQVRFEV TFASLAPHLK VLAPLREWEF TSRESEIAYA LEHNIQVSAT KKNPYSIDEN
IWGISIECGV LEDPMVAPPE DAYQITTSPE NAPNTPAVVE IEFEKGIPVS LDGKKMSGLD
LIIRLNEIGA ANGVGRLDMI ENRVVGIKSR EIYEAPAATI LHFAHRELER LTLEKSVFQY
KKNISQDYAN IIYNGLWFSP MRKALDAFVD ETQNPVTGLV RLKLYKGGVS LLGRNSPYSL
YNEELATYTE SDTFNHKAAA GFIHLYGLGL KTYSEVHTAK
|
|---|
| |