Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1375 |
Symbol | |
ID | 6463655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1439539 |
End bp | 1441083 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727614 |
Product | pentapeptide repeat protein |
Protein accession | YP_002018255 |
Protein GI | 194336461 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAC AGAACATCAT GCCCGACTGG AGCTTCAAAA AAATCCGCGA AAGAATCGCC GACCGAAACC GGGCGCCGAG AAGTTGCTGG TATCCTGTTG CGCATCAGCA ATCGCACCAC CCGGATGCAC TCAAGGAACT CCACGCGAGT TACGCAAAAA CGATCAACAA AACCATGTTT GCGCTGCTTG GTGTTGGGCT CTACTGTTTG CTCAAGGTTT TTGGCGAATC CGACAAATCC CTTATCGTCG CAAACACAAC CATTCAAACC CCGGTGGTTG GCACCGCCAT CTCTTTTCAA AGTTTTCTTG TCGTAGCCCC ATTTCTCCTT GTTATCCTGA CAGTCTATCT TCATATCGTT TACGGACATT GGTTACAGCT TGAAAGAGAG CGCCAGCATC TTAACGAGAC GCGAAAGAAT TCTGCTGACC TCACTATCGA GAGTATTCCC GCTCTGTTCA GCTTCAAAGA GCGCCTGCCG CGCCTCTTCA CCAATCTCGT TTTTTACTGG TTTGTGCCGT TGACCTTGTG GTTTATGGCC CGCAAGGCTT TTGCCCTCAG GGAGTTCATC GTTCCCTTTT CTATTGGTGC ATCCATTGTC ACCCTCTCCC TGCTTTTTTT GCAAATCAAT CGTTGCCCCG ATTCAAAAGC TGAAACAAAA TTCACTTCAA AACGGTGGTT CTGGAATCTT CCCCGATGGG TAGCTTTTGG AGCGCTTGCA GCGTTCACGC TCAATCTTCC CTCTCTTTCC GAATCATTCC GCCGGCCACT CGATCTTCAG CGGGAAGATC TTCACGGCGC ATGGTTGCAA GGTCTCGATA TGACTGTAGC TGATATGAAT AACGCTAACC TTCAGGGGGC GAACCTTGGC GGAGCAAATC TTCAGAGCGC AGATCTTCAA CATGCCAATC TTCAGGGAGC TAATCTCAAG GGGGCACAGT TACAAAAAGC ACACCTTAAC GGCTCCAATT TTCAGGGTTC TAATCTTGGT GGAGCAAATT TTGATGGTGC AGACCTGTTT TATGCCAATT TTAGGGAGGC AAAAGAGATG GAACTGTATC GAATCAAAAA GGCGGTAAAT TCTAATCGGG CCTTTTACAG TAGTGAGTTA CTTTCGATTC TCAAATTCTC TCCAACTCAC AATGATGACC TTGCAATCAT TGGCAATTAC TATGGCGGGG GTAAAATTGC CTATATTTTT CAGCCAGATG ACAAGGGTTA TGTTAATGGT GAACGGCACG GCCTGATTGC CGCTGAAACC GATTTGCCGG GAGAGGACAA ATACACATGG GATGCAGCTA ATAAAGCTTG TGACGAGTTG GTCAAAAATG ACTATGATGA TTGGTATTTG CCGAGCAAGG AAGAGTTGAA CCAGCTATAT CTTAACAGAA GTGCTGTTGG TGGTTTTACT TCCGGCGTCT ACTGGAGTTC TACGGAGGGC AATGCGGTCA ACGCATGGCA CCAAAGTTTC GACGGTGGGA TTCAGAACTA CAGCTACTAC TATAAGGACG ATGAGTGGCG GGTGCGGCCT GTCCGGGCTT TTTAA
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Protein sequence | MIKQNIMPDW SFKKIRERIA DRNRAPRSCW YPVAHQQSHH PDALKELHAS YAKTINKTMF ALLGVGLYCL LKVFGESDKS LIVANTTIQT PVVGTAISFQ SFLVVAPFLL VILTVYLHIV YGHWLQLERE RQHLNETRKN SADLTIESIP ALFSFKERLP RLFTNLVFYW FVPLTLWFMA RKAFALREFI VPFSIGASIV TLSLLFLQIN RCPDSKAETK FTSKRWFWNL PRWVAFGALA AFTLNLPSLS ESFRRPLDLQ REDLHGAWLQ GLDMTVADMN NANLQGANLG GANLQSADLQ HANLQGANLK GAQLQKAHLN GSNFQGSNLG GANFDGADLF YANFREAKEM ELYRIKKAVN SNRAFYSSEL LSILKFSPTH NDDLAIIGNY YGGGKIAYIF QPDDKGYVNG ERHGLIAAET DLPGEDKYTW DAANKACDEL VKNDYDDWYL PSKEELNQLY LNRSAVGGFT SGVYWSSTEG NAVNAWHQSF DGGIQNYSYY YKDDEWRVRP VRAF
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