Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1359 |
Symbol | |
ID | 6461627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1423831 |
End bp | 1424265 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642727599 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_002018240 |
Protein GI | 194336446 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG CAGTTGGAAG CGATCATGCC GGATTTACAT TCAAAAAAAC TGTTACCGAT TGGCTTGAAC GCCATGATTA TGAATTCGAC GACATGGGGC CATATAATGA GGAATCAGTC GATTATCCCG ATTATGCCCG CAAAGTTGCC GAGGCTGTAG CAGCTCAGCA GTGCGATTCG GGGATACTGT TGTGCGGAAC TGGTATTGGT GTTTCAATTT CAGCCAATAA AATCAAGGGC ATCCGGGCGG CTCTTGCCTG TAACCCGGAA TTCGCGACAC TTGCCCGACA GCATAATAAT GCCAATATTA TCTGTTTTTC CGCGCGTTTT ACCGATAAAG CTACGATTGA ACAAAGTCTT CACAACTGGT TTACCACCGA TTTTGAAGGG GGAAGGCATC AGCGAAGAGT GAATAAAATC GAACCATGCT GTTAA
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Protein sequence | MKIAVGSDHA GFTFKKTVTD WLERHDYEFD DMGPYNEESV DYPDYARKVA EAVAAQQCDS GILLCGTGIG VSISANKIKG IRAALACNPE FATLARQHNN ANIICFSARF TDKATIEQSL HNWFTTDFEG GRHQRRVNKI EPCC
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