Gene Ppha_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1359 
Symbol 
ID6461627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1423831 
End bp1424265 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content45% 
IMG OID642727599 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_002018240 
Protein GI194336446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CAGTTGGAAG CGATCATGCC GGATTTACAT TCAAAAAAAC TGTTACCGAT 
TGGCTTGAAC GCCATGATTA TGAATTCGAC GACATGGGGC CATATAATGA GGAATCAGTC
GATTATCCCG ATTATGCCCG CAAAGTTGCC GAGGCTGTAG CAGCTCAGCA GTGCGATTCG
GGGATACTGT TGTGCGGAAC TGGTATTGGT GTTTCAATTT CAGCCAATAA AATCAAGGGC
ATCCGGGCGG CTCTTGCCTG TAACCCGGAA TTCGCGACAC TTGCCCGACA GCATAATAAT
GCCAATATTA TCTGTTTTTC CGCGCGTTTT ACCGATAAAG CTACGATTGA ACAAAGTCTT
CACAACTGGT TTACCACCGA TTTTGAAGGG GGAAGGCATC AGCGAAGAGT GAATAAAATC
GAACCATGCT GTTAA
 
Protein sequence
MKIAVGSDHA GFTFKKTVTD WLERHDYEFD DMGPYNEESV DYPDYARKVA EAVAAQQCDS 
GILLCGTGIG VSISANKIKG IRAALACNPE FATLARQHNN ANIICFSARF TDKATIEQSL
HNWFTTDFEG GRHQRRVNKI EPCC