| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1319 |
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| Symbol | |
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| ID | 6461976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1386331 |
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| End bp | 1387689 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727560 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_002018201 |
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| Protein GI | 194336407 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA CCATTCTTGT TGTCGAAGAT GAAAAGGTAC AACTGGAGAG CATTGCCGGT
TATTTATCCA AACAAGGCTA TCATGTGCTT ACCTCATCAC GGCCGGTTGA GGCATTGGTC
ATAGCAAGGG AGCATGCTGT CGATATTGTG CTGACTGACT TCAAAATGCC CGCAATGAGC
GGTGTGGAAC TTCTCGATGC ACTCAAAAAA CTGAATCCCG GTATTGAAGT GATTATCATG
ACCGCATATG GCAGTATTGA GTCGGCAACA GAGGCTATGA AGCTCGGAGC GGTGGACTAT
ATTACCAAAC CCATTGATCT TTGCCAGCTT CAGCTTATGA TCCGTAACAC ACTGGAACGG
AAGTTACTTG TCAGTGAAAA CCGTCAGCTT CGCCAGCAAC TTTCAGAGCG CTTCAGTTTC
GAGGGGATTG TTTCACAATC AACAGCAATG AGCCAGGTAC TCAATATTGC CGGGCGGGTA
GCTTCCAGCA ACGCACCTGT TCTTATTACC GGTGAGACCG GAACAGGCAA GGAGCTTATC
GCCAAAGCGG TTCATTTTGC AGGTTCCCAC CATGAAAAAC CTTTTGTTGC TGTCAACTGT
GCAGCGCTGC CTGAAAATTT GCTTGAAAGT GAACTTTTCG GCCATGAGAA GGGTGCGTTT
ACGGGAGCTG ATCGTCAGCG CAAAGGGCGT TTTGAAATGG CTGAAGGAGG AACCCTCTTT
ATTGATGAAG TTGGCGAAAT ACCACTGGCC TTGCAGGTCA AACTGCTCAG GGTTTTACAG
GAAAAATCAT TTGAACGTGT CGGAAGTTCT CATTCTCTTC AGACAAATGC GCGCATTGTT
GCAGCAACCA ACCGGGATTT GGAGGCGATG GTGCGAGAAG GGAAATTCCG GGAAGATCTT
TTCTATCGCC TGAACGTTGT TGCTATCAGA ATTCCTCCAC TCAGGGAACG CAGGGCTGAT
ATTCCTCCAC TTATCGATGC ATTTATCTCG CGCTTTGCTT CCGAAAACAA GAAACGGATT
ACCGGTATTT CAAGGGAGGC AATGGATACG CTTATGAAAT ATCCCTACCC GGGCAATGTT
CGTGAACTTG AAAATATTGT GCAGCAGTCC ATTGTGCTTT GTCGCGCGGA GATAATTACC
CGTGACGACC TGCCGTTACG GGTTCATGAA GCCTTTTCCG AAAAAGCATC ACCCCTCGAA
ATGGAGGGAA CGTTCATCGA AAAGGTGGAA GCTTTTGAGA AATCATTGAT TCTTGCAGCA
CTGAAAGAGG CTGGTAATGT GCAGACACGC GCATCCGAAC GGCTGGGAAT AGGCGAAAGA
CATCTGCGAT ACAAGCTGAA AAAATATGGA ATGAAATAA
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| Protein sequence | MSHTILVVED EKVQLESIAG YLSKQGYHVL TSSRPVEALV IAREHAVDIV LTDFKMPAMS
GVELLDALKK LNPGIEVIIM TAYGSIESAT EAMKLGAVDY ITKPIDLCQL QLMIRNTLER
KLLVSENRQL RQQLSERFSF EGIVSQSTAM SQVLNIAGRV ASSNAPVLIT GETGTGKELI
AKAVHFAGSH HEKPFVAVNC AALPENLLES ELFGHEKGAF TGADRQRKGR FEMAEGGTLF
IDEVGEIPLA LQVKLLRVLQ EKSFERVGSS HSLQTNARIV AATNRDLEAM VREGKFREDL
FYRLNVVAIR IPPLRERRAD IPPLIDAFIS RFASENKKRI TGISREAMDT LMKYPYPGNV
RELENIVQQS IVLCRAEIIT RDDLPLRVHE AFSEKASPLE MEGTFIEKVE AFEKSLILAA
LKEAGNVQTR ASERLGIGER HLRYKLKKYG MK
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