Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1304 |
Symbol | |
ID | 6462415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1364926 |
End bp | 1365756 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642727545 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_002018186 |
Protein GI | 194336392 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACAC AGGAAAAATA CAGAACCGCA GTCAAAGAGC TTCTTGCCAG CGGAACGGTA AAAATGGTTA TTGGCTACAA ACCAGGCTCA ACCTCCGACC GGCGCCGACC ACTCTTTATC CGCACCTCTG AAGAGGCTGA TCAGCTTGTG CTCGACAGTC TCTGCGTCAC AAATCTCTCG GGATATCTTG TTGCCGAAGG GCTGCTGAGC GATGAAAAAA AGGTCGGCAT TTTTCTGCGA CCCGAAGGAA TTCGCTCCAT CAATATCCTC GCCGCAGAAT CACAACTCAA TGCCGACCAG GTCGTTATCC TCGGATTCGA CTCCATCGAC AGAGCGGTCA GCCCGTTACA GGGCCGCCAT GCCAGCGACT TCTCCGATCT GATAGGCGAC AGCAAGGAAC ACCCCAGGCA AATACCTGAA GAGCCTCTTC TTGAGCGTAT CGGGAAAATG GATACACGGG AACGATTCGA CTTCTGGCAG GAGGAGTTTT CACGCTGCAT CAAATGCTAT GCCTGCCGCC AGGCTTGTCC CATGTGCTAC TGCCGCCGAT GCATTGTTGA CAACAATCAG CCTCAGTGGA TCAATACCTC ATCGCATACC CTCGGCAATT TCGAATGGAA TATTGTCCGG GCATTTCACC TTGCCGGACG ATGCGTTCAA TGCGGCAACT GCGACCGCGC CTGCCCCGTC AACATCCCGC TCCGCCTCAT CAACCAAAGA ATGGCCAAAG AGGTGATGGA GGAATTCGAT CATTTTGCAG GGTTAAGCCA GACCCAGGAG CCGGTACTTG CAAGTTTCAA AAAGGACGAC ACCGAGACAT TCATTCTCTA A
|
Protein sequence | MITQEKYRTA VKELLASGTV KMVIGYKPGS TSDRRRPLFI RTSEEADQLV LDSLCVTNLS GYLVAEGLLS DEKKVGIFLR PEGIRSINIL AAESQLNADQ VVILGFDSID RAVSPLQGRH ASDFSDLIGD SKEHPRQIPE EPLLERIGKM DTRERFDFWQ EEFSRCIKCY ACRQACPMCY CRRCIVDNNQ PQWINTSSHT LGNFEWNIVR AFHLAGRCVQ CGNCDRACPV NIPLRLINQR MAKEVMEEFD HFAGLSQTQE PVLASFKKDD TETFIL
|
| |