Gene Ppha_1294 details

Gene Information

• Locus tag: Ppha_1294
• Symbol: cobT
• ID: 6463680
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1353642
• End bp: 1354706
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642727535
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_002018176
• Protein GI: 194336382
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGAAA AGTTGCAGTT ATTGCTGGAT CGAATTAAAC CTGCCTCCCG GTCGCTGAGT 
GATGCGGCCC GAGCCCATCT TGATGATTTG ACCAAACCGC AGGGGAGTCT TGGCCGTTTG 
GAGGAGATTG CTCTTAAATA TGTTCTGGCG ACCGGCAACC TGAGCCCGTT GCTTTCAAAA 
AAGAAAATCT GCTGTTTTGC CGCCGATCAT GGTGTGGCGG CTGAAGGGGT TTCGGCTTTT 
CCGGCAGAGG TGACTCCTCA GATGGTTTAT AACATGCTCG GTGGCGGAGC GGCCATTAAT 
GTGCTGACGC GTCATGCGGG TGTTGACCTC GATGTGGTGG ATATGGGTGT GAACCATGAT 
TTTCCTGATC TGGCAGGGCT CGTCAAAAGA AAGGTGCAGC CGGGAAGCGC CAATATGGCT 
ACCGGCCCCG CCATGAGTGA GGAGGATGCC CTGCAGGCTC TGCTTTGCGG TGCTGAACTG 
GCGGCTGAAG CCCAGGAGGC GGGCTACCAT CTCCTTGGAA CCGGTGAGAT GGGGATTGCC 
AATACCACTC CGGCAACGGC GCTCTATGCT GTTTTGCTTG ATGTATCGGT TGAGAGCATT 
ACAGGAAGGG GCACCGGTAT TGATGATGAG CGCCTGCTCC ACAAGATTGC TGTTATCAAA 
CAGGCGATTG CCGTTAATGG CTCCCGCTGC ACCACGCCGT TCGCGACGCT TGCCGCGCTT 
GGTGGTTACG AAATTGCGGC CATTGCCGGA TTCATTCTTG GCGCAGCCGC AGCCCGCACT 
CCTGTGGTTG TTGATGGCTT TATCTCTTCT GCAGGAGCGG TGGTGGCGCT CAAACTCTGC 
CCGGCAGTTG AAGACTATCT TTTTTTCAGC CATCTCTCCA ATGAACAGGG GCACAGGGCA 
GTTATGGAGA AGCTTGGCGC CCGGCCGATT CTTGATCTTG ATCTTCGCCT TGGTGAGGGG 
ACGGGTGCGG CTATTGCTAT GCAGCTTATT GAGGGCGCTG TAAAAATTTA CAATGAGATG 
GCCACCTTCA GTGCTGCAAG GGTCAGTGAA AAAAGCGGGG AGTAG 

 

Protein sequence

MPEKLQLLLD RIKPASRSLS DAARAHLDDL TKPQGSLGRL EEIALKYVLA TGNLSPLLSK 
KKICCFAADH GVAAEGVSAF PAEVTPQMVY NMLGGGAAIN VLTRHAGVDL DVVDMGVNHD 
FPDLAGLVKR KVQPGSANMA TGPAMSEEDA LQALLCGAEL AAEAQEAGYH LLGTGEMGIA 
NTTPATALYA VLLDVSVESI TGRGTGIDDE RLLHKIAVIK QAIAVNGSRC TTPFATLAAL 
GGYEIAAIAG FILGAAAART PVVVDGFISS AGAVVALKLC PAVEDYLFFS HLSNEQGHRA 
VMEKLGARPI LDLDLRLGEG TGAAIAMQLI EGAVKIYNEM ATFSAARVSE KSGE