| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1262 |
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| Symbol | |
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| ID | 6463749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1323163 |
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| End bp | 1325118 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727503 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002018144 |
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| Protein GI | 194336350 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.612585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA AAGTATTTCT CGTCGTTGTG GCCGGCTTGC TTTGCAGCAG GGGGCTTCTG
GCTGAAGAGC AGCCAAAAAG CTTTACCGGA GAGGAGATGG TGGTTACTTC AAGCCGAGTT
GAGGAGCCAA AGAAAAATGT GACCTCCAAC ATTACCATTA TCGGCAGGGA GGAAATTGAG
CGCTCCTCAG CACAGGATCT CGGTGCACTG CTTGCCGAAA AGAATCTTGG ACAAATCCAG
AAATATCCCG GAACCTTGAC TTCGGTTGGT ATCAGAGGGT TCAGGAGTGA ATCGCATGGT
AACGATCTGA TGGGCAAGGT GCTTGTGCTT GTTGACGGGC GTCGTGCCGG CACGGGCAAT
CTTGCCAAAA TCATGACTGA CAATGTTGAG CGCATCGAAA TTATTCGTGG CCCGGCGGCC
GTACAGTATG GTTCAGCAGC GATAGGAGGT GTTGTTAATG TCATTACAAT CAGGGGTGAA
GCGGCTCCCT CTCTCTTCAT CGAACAGAAC GTTGGAAGCA ATGACTACTC AAAAACAGCC
GTGGGCGCTC AGGGACGAGT CGGTAACCTT GATTTTTCAG GCAGCTTCTC AATTTCTGAT
TCAGGCGATT ATTTAACCGG TTCCAATGAA AGGTATCTGA ATACCGGTTA CAGCGACCAG
ACCCTTGCGA GCTTCAATAT TGGGTATGAG TTTTTGCCGG GACAGAGGGT TGGTATAAAC
TACCACTCTT TCGATGTTGA AAAAGCGGGC TCTCCCTCCT ATCTGAGTCA GAATGATCTT
TCCAGTTACA CGGTCAATAA TAATCACTCG CTCGATTTTA TCTATGAGGG TTCATTGTCT
GACAAGCGCT TTTCATGGAT GGCCCGTTAT TTTACCGGTA TGGATGAATA CCAGTATGTC
GATCCCGTCT ACTCCTATAA AAGCAGCAGC GATGTTGACC AGAGAGGCGC ACAGGCCCAG
TTGACCTTTT CAAAAGAGTC GCTGAGGCTG ACCGCTGGTG TTGACTGGCT GCAGTATGAC
CTTCAATCGA CGCTTGTTCC TCTCTGGAGC AAATATGAGA ATCCCGCCGC TTTTCTTCTT
GGTAAATATG GCTTGTTCGA TGACCGGTTG ATTGTGACGG CGGGTATTCG TTATGATGAT
TACAGGGTTG ATATGGCCGA AGGCGAGGGA AGCTCAAGAT CGAGTGATAA TTTTTCGCAG
CAGGCTGGCC TTGCCTGGCA TCTCACTGAT GTGCTGAAAC TCAGAGGCTC TTATGCTGAG
GGATTCAGAA TGCCCTCCGC AAGGGAGTTG GCTGGCCAGA TCAACTCTTT CGGAAAAATC
TATATCGGCA ATCCCGATCT GAATCCTGAG ACCAGTGATA CCTGGGAAGC GGGATTTGAT
GTCGTCAGCA AGGGGCTGAA CTCCTCCTTC ACCTGGTTCA CCACCGACTA TACCGGGATG
ATCGAAACGG TTGCAACCGC ACCAAATTCA TTCACCTATC GCAATATAGG CAGTGCAAGG
GTTTCAGGAA TAGAATCGGA GCTTTCATGG AAACTGAACG CCCTCTCTCC TTCATGGGTA
TTTGAGCCCT ATGTCAATTA CACGCATTTG CTCGAATACA AGGATAACGC TACAGGAAAA
CATCTGCTTT ATACCCCGCA GTGGAATGCG AGTACCGGTC TGCGTCTTCG TGATATGAAC
GGCTTCAGCG CGGCATTTAG TGTGGCCTGT ACCGGAAAGA GTATGATTCA GGATTATGAG
AGTAGTTGGT CAGGACTCGT TGTCACGAAA GGCAGTTTTG CTGTCGCTAA TGTGTCAGCT
TCGAAGAGAT TTTCGCTTGG TACGGAGGGA AAGAAGGGAT TGGGTATTAC CCTGAAAGCA
GAGGTCGATA ATCTGTTTGA TCGCCAGTAC CAGTATGTAA AGGGGTACAC GATGCCAGGT
CGTACCGTTG TGTTTGGATT GAAGGCTGAT ATTTGA
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| Protein sequence | MNKKVFLVVV AGLLCSRGLL AEEQPKSFTG EEMVVTSSRV EEPKKNVTSN ITIIGREEIE
RSSAQDLGAL LAEKNLGQIQ KYPGTLTSVG IRGFRSESHG NDLMGKVLVL VDGRRAGTGN
LAKIMTDNVE RIEIIRGPAA VQYGSAAIGG VVNVITIRGE AAPSLFIEQN VGSNDYSKTA
VGAQGRVGNL DFSGSFSISD SGDYLTGSNE RYLNTGYSDQ TLASFNIGYE FLPGQRVGIN
YHSFDVEKAG SPSYLSQNDL SSYTVNNNHS LDFIYEGSLS DKRFSWMARY FTGMDEYQYV
DPVYSYKSSS DVDQRGAQAQ LTFSKESLRL TAGVDWLQYD LQSTLVPLWS KYENPAAFLL
GKYGLFDDRL IVTAGIRYDD YRVDMAEGEG SSRSSDNFSQ QAGLAWHLTD VLKLRGSYAE
GFRMPSAREL AGQINSFGKI YIGNPDLNPE TSDTWEAGFD VVSKGLNSSF TWFTTDYTGM
IETVATAPNS FTYRNIGSAR VSGIESELSW KLNALSPSWV FEPYVNYTHL LEYKDNATGK
HLLYTPQWNA STGLRLRDMN GFSAAFSVAC TGKSMIQDYE SSWSGLVVTK GSFAVANVSA
SKRFSLGTEG KKGLGITLKA EVDNLFDRQY QYVKGYTMPG RTVVFGLKAD I
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