| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1204 |
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| Symbol | |
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| ID | 6462968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1258698 |
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| End bp | 1260071 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727452 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_002018093 |
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| Protein GI | 194336299 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGAT CTTCTACCAG ATACATCTGC TCTAACTGCG GGGCCATCTC CCTGAAATAT
CAGGGGAAAT GTTTTGAATG CCAGAGTTGG GGGACACTTC AGGAGAGCCG TGTCGAGCCC
GAACAGAAAA AACAGAGGGA TGGTTCAACA AGAGGAGTTG CCGTTATGGA GAACCTGCAT
GACTCTGTGC CCTCGGAATT TCAGCGAGTC ATGACTGGCA TTGGAGAGCT CGACCGGGTA
CTCGGAGGAG GACTTATGCA GGGATCTGCT GTTCTGGTGG GAGGAGAACC CGGTATTGGT
AAATCTACCC TCATGCTCCA GCTTGCTCCC CGCCTCGCAC CGGCCAAGGT GCTCTATATC
TCCGGTGAAG AGTCGCCGAA CCAGATCCGC GAACGGGCAC AGCGCCTCTC CATTAAGGCT
CCTAACCTCT GGCTGATACC GGAAGTGAAC CTTGAGAGCA TCCTTGCAAT CATTGCACAC
GAGAAACCGG CACTGGTCAT TATTGATTCC ATTCAGACAG TCCATTCTGA TGAATACCAG
AGTTCTGCCG GTACCATTAC CCAGATCAGG GAGTGTGCTG CCACGCTCAT CAGGGCGGCC
AAGCAGCAAA ATGTGATTTT GATGATTATC GGCCATATCA CCAAGGAGGG TGCGCTTGCC
GGACCCAAAG CCCTTGAGCA TATGGTCGAT ACCGTCCTGC AGTTTGAAGG TGAAGGGTAC
CAGCGCTACC GCATTATCCG CTCAGTCAAG AACCGCTTCG GTTCCACCAA TGAAATCGGT
GTCTTCCGTA TGGATGAGAG TGGCCTTGAA GAGGTCAGTA ATCCGTCGGA ATTCTTTATC
TCCGGACGCA GAACCGATGT GCCCGGAAAT TCAATCCTGG CTGCTATCGA AGGAACAAGA
GCACTTCTGG TTGAGGTTCA GGCGCTGGTC TCGAAGACCA ACTACTCCAT GCCTCAGCGT
ATCAGCACAG GATTCGACCT GAAACGCATG TCGATTATCC TTGCTGTGCT TGAAAACAGG
CTTCGCATCG AAACCTGGGG ACAGGATGTC TTCGTAAAAA TTGCCGGCGG CCTGAAACTG
GCTGAACCCG CAGCAGACCT TGCCATTGCT GCTGCCATTG CTTCAGGGCT GATGAACCGT
CCGGTCGATC CGGCAACGGT CTGCTGCGGA GAAATCGGTC TTGCAGGTGA ACTGAGGGCT
ATCAGCGACA GCGAACGGCG CATAAGGGAG GCGGCCCATC TTGGCTTCAA GCAAATTGTG
CTGCCCGAAG CCAATACCCG CGAACTGAAA CCATCACTGA AAAATCTCCC CATCATCATC
ACGGGATGCA AAACACTCCA GAACGCACTT GATGAGCTTA ATGTGACTGG ATAA
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| Protein sequence | MARSSTRYIC SNCGAISLKY QGKCFECQSW GTLQESRVEP EQKKQRDGST RGVAVMENLH
DSVPSEFQRV MTGIGELDRV LGGGLMQGSA VLVGGEPGIG KSTLMLQLAP RLAPAKVLYI
SGEESPNQIR ERAQRLSIKA PNLWLIPEVN LESILAIIAH EKPALVIIDS IQTVHSDEYQ
SSAGTITQIR ECAATLIRAA KQQNVILMII GHITKEGALA GPKALEHMVD TVLQFEGEGY
QRYRIIRSVK NRFGSTNEIG VFRMDESGLE EVSNPSEFFI SGRRTDVPGN SILAAIEGTR
ALLVEVQALV SKTNYSMPQR ISTGFDLKRM SIILAVLENR LRIETWGQDV FVKIAGGLKL
AEPAADLAIA AAIASGLMNR PVDPATVCCG EIGLAGELRA ISDSERRIRE AAHLGFKQIV
LPEANTRELK PSLKNLPIII TGCKTLQNAL DELNVTG
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