Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1175 |
Symbol | recR |
ID | 6463485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1229003 |
End bp | 1229617 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727423 |
Product | recombination protein RecR |
Protein accession | YP_002018067 |
Protein GI | 194336273 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000261474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTATA CTTCGGCTGC CCTGGAATCT CTTATTGATG AATTTGCAAA ACTCCCTGGT GTCGGACGCA AAACTGCCCA GCGTCTTGCC ATGTATATTT TGCGTGAGCC AAGAGCTGAG GCAGAAAGGC TGGCCGAAGC CCTGCTTGAA GCCAAAGATA ACGTTATTCG TTGTTCTGTT TGCCAGAACA TCACTGATGT CGGCGTCGAT CCTTGTGCAC TCTGTACCAG CAAGGCACGT GACCGTTCAG TGATCTGCGT TGTCGAATCT CCCGTTGATA TGCTCGCTTT TGAAAAAACC GGCCATTACA AGGGGCTCTA CCATGTTTTG CATGGAGTTA TCTCACCCCT TGATGGTATT GGTCCTGACG ACATCAAGGT GCGGGAACTG TTGTTGCGGT TCACAATGCC GCAGAGTCCA GCAGTCAGGG AGGTTGTTCT TGCCCTGAAT CCGACCATTG AAGGAGAAAC AACAGCGCTC TATCTCAGCA AGCTTCTCAA GCCACTTGGC ATCCATGTTA CAAAAATAGC TCGCGGGATT CCAGTTGGAG CGGAGCTTGA ATTTATCGAT GAAGCAACCC TTTCACGGGC AATGGAAGGA CGCACGGTTG TATAG
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Protein sequence | MRYTSAALES LIDEFAKLPG VGRKTAQRLA MYILREPRAE AERLAEALLE AKDNVIRCSV CQNITDVGVD PCALCTSKAR DRSVICVVES PVDMLAFEKT GHYKGLYHVL HGVISPLDGI GPDDIKVREL LLRFTMPQSP AVREVVLALN PTIEGETTAL YLSKLLKPLG IHVTKIARGI PVGAELEFID EATLSRAMEG RTVV
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