| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1173 |
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| Symbol | |
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| ID | 6462470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1227638 |
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| End bp | 1228621 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727421 |
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| Product | Transketolase central region |
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| Protein accession | YP_002018065 |
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| Protein GI | 194336271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000393635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA ATAACATCGG GGTTCCGGCT TCGCCATATG TTTCGCGGGG AAACAAAGCT
ACCCGTACCG GGTTTGGCGA AGCTTTGCTT GAAATAGGCA GGGAGGATAG TTCTGTTGTC
GCTCTGTGCG CCGATTTGAC GGGCTCCCTG AATATGAATT TATTTCGCGA TGCTTTTCCC
GACCGTTTTA TCCAGACAGG GATCGCTGAG GCAAACATGA TCTCCATGGC TGCCGGTCTT
GCGACAACAG GCAAAATACC GATTGCAGCA ACGTTTGCCG TCTTTGCTAC TGGCAGGGTT
TACGATCAGA TACGCCAGTC GGTCTGTTAT TCAAATCATA ATGTAAAGAT CTGCGCTTCA
CATGCAGGGC TGACACTGGG TGAAGATGGA GCTACCCACC AGATTCTTGA GGATATTGGC
CTTATGCGTG GTCTGCCAAG AATGACGGTA GTTGTGCCCG CCGATTACAG TGAAACCATT
CGTGCGACCA GGGCCATTGT GAAGCATCAG GGGCCAGTCT ACCTTCGTTT CGGAAGGCCG
AACATTCCTG ATTTTTCGCT TGACGAGGAT GGCTTTGAAA TCGGCAAGTC GATCGAGCTC
CATCCAGGAA AAGATGTTAC CGTCATTGCC TGTGGTATCA TGGTCTGGAA AGCTCTTGAA
GCTGCGCGTA TACTTGAAAA AGAGGGGGTT GGCGTCAGGG TGATCAACAT GCACACGATC
AAGCCAATCG ATACGCTTGC TATCGTTCGC GCGGCCAATG ATACCGGCGC TCTTGTTACG
GCTGAAGAGC ACCAGACCTT TAACGGTCTT GGTGATGCAG TGGCCCATGT TTGTGCTCTC
AATATTCCGG TACCGATTGA GATGGTCGGA GTTGAAGATC AGTTTGGCGA GTCAGGAAAA
GCTGATGAGC TTCTGGAAAA ATACAGGCTG ACAACCGGAG ACATTCTTGA AAAAATTTAC
ATCGCTCTGC GCAGAAAGAG TTGA
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| Protein sequence | MEENNIGVPA SPYVSRGNKA TRTGFGEALL EIGREDSSVV ALCADLTGSL NMNLFRDAFP
DRFIQTGIAE ANMISMAAGL ATTGKIPIAA TFAVFATGRV YDQIRQSVCY SNHNVKICAS
HAGLTLGEDG ATHQILEDIG LMRGLPRMTV VVPADYSETI RATRAIVKHQ GPVYLRFGRP
NIPDFSLDED GFEIGKSIEL HPGKDVTVIA CGIMVWKALE AARILEKEGV GVRVINMHTI
KPIDTLAIVR AANDTGALVT AEEHQTFNGL GDAVAHVCAL NIPVPIEMVG VEDQFGESGK
ADELLEKYRL TTGDILEKIY IALRRKS
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