| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1172 |
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| Symbol | ksgA |
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| ID | 6463631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1226778 |
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| End bp | 1227566 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642727420 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_002018064 |
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| Protein GI | 194336270 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000173217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAG TTGTTGAATA TAAGCATACA GAAATAGCAG TAAAAAAAAA ATTAGGTCAA
AACTTTCTCA CAGACCGTAA TATCACAAGA AAAATAGTAA TTGCATCAGG CGCCACTCCC
CAAGATAACA TTCTTGAAAT TGGCCCTGGA TTCGGTGCCC TGACAAGAGC GATCATGGAA
TTCTGCCCAC TCTTCACCGT CGTCGAAAAA GACCACAAAC TCGCGGACTT CATCCGATCT
GAATATCCAC AACTCAACCT CATTGAAGGC GACTTTCTCG AAACCGATCT TGCCGCACTC
GCACACGATA AACCACTCAA AATACTCGGC AACATCCCCT ACTCCATCAC GACACCGATC
CTTTTTAAAC TGCTTGAACA CCGTCATACT TTTTTTTCAG CAACACTGAT GATGCAGCAT
GAAGTCGCCA TGAGAATTGT TGCACATCCA AGCACAAAGG ATTATGGCAT TCTTGCTGTT
CAGATGCAAG CTTTCTGCGA TGTCAACTAT CTTTTCAAGG TTGGACGCAA AGTCTTCAGA
CCACAACCAG GTGTCGACAG TGCTGTTTTG CAGATGACTC CAAAAAACAA TGTCCCCTTG
AACGATGCTG ACGGGTTCCG TCGCTTTGTC CGAATAGCTT TTCACCAGCG CCGAAAAACC
CTGCTGAACA ATCTCAAAGA GAGCTATAAC CTTGAATCAG TAGCAAACCA TACCCTGAAA
CTGAGAGCCG AAGCACTCTC AGTTGAAGAT TTTTTTCAAC TCTTCAGAGA GCTGAAACCA
CTGACCTGA
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| Protein sequence | MRKVVEYKHT EIAVKKKLGQ NFLTDRNITR KIVIASGATP QDNILEIGPG FGALTRAIME
FCPLFTVVEK DHKLADFIRS EYPQLNLIEG DFLETDLAAL AHDKPLKILG NIPYSITTPI
LFKLLEHRHT FFSATLMMQH EVAMRIVAHP STKDYGILAV QMQAFCDVNY LFKVGRKVFR
PQPGVDSAVL QMTPKNNVPL NDADGFRRFV RIAFHQRRKT LLNNLKESYN LESVANHTLK
LRAEALSVED FFQLFRELKP LT
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