| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1163 |
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| Symbol | |
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| ID | 6462553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1214960 |
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| End bp | 1215982 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727411 |
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| Product | NmrA family protein |
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| Protein accession | YP_002018055 |
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| Protein GI | 194336261 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00319088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATACTT CTTTGCACTC TCCGCCAAGA CGGCATGAAC GTGTTTTTGT TGTTGGAGCC
ACTGGATATA TCGGGAAATT TGTTGTGCGT GAACTGGTTG CCAGGGGATA TGATGTGGTG
AGTTTTGCCC GTGAGCGTTC AGGTGTTGGT TCGATGACGA GGGCTGATGA GACTCGTGCC
CAGTTACAGG GTTCCGAGGT ACGGTTCGGG GACGTAAGCA ACATGGAGTC TCTGATGAAG
AATGGTATCT GCGGGGAGCA TTTTGATGTG GTTGTTTCCT GTCTGACTTC TCGCAATGGG
GGTGTGAAGG ATTCGTGGAA TATCGACTAT CAGGCCACAC GCAATGCGCT TGACGCAGGC
AAGGCTGCGG GAGCGACCCA TTTTGTGCTG CTTTCAGCAA TCTGCGTCCA GAAGCCGTTG
CTTGAGTTTC AGAGAGCGAA ACTGAAATTT GAGCAGGAGC TGAAAGAGTC CGGTTTGACC
TGGTCTATTG TTCGTCCGAC AGCCTTTTTC AAGTCTATTG CCGGTCAGGT TGAGTCGGTC
AAGAAGGGCA AGCCCTTTGT AACGTTTGGT AATGGAGAAT TGACCTCCTG CAAGCCGATT
AGTGAGTCCG ATCTGGCGCG ATTTATTGCT GATTGTCTCG AAGATTCAGA AAAGCAGAAT
AAAATTCTGC CCATTGGCGG TCCAGGAAGG GCGATTTCTC ACAAGGAACA GGGTGAAATG
CTTTTTGAGC TTCTTGGTCG CACGCCAAAG TTCAAATATA TGCCGATTCA GATGTTCGAC
GTGATTATTC CTTTGATGAG CCTGCTTGCA AAGATCTTTC CAAAATTGCA GGATAAGGCT
GAGTTCGCCC GTATTGGCAA GTATTACTGT TCAGAGTCCA TGCTTGTACT CAATCCGCAG
ACAGGGAAAT ATGATGCTGA CATGACGCCA TCCTATGGCA GTGATACGTT GCGCGATTTT
TACAAAAGAG TTTTGAAAGA GGGGATTGCC GGACAGGAGC TTGGTGAGCA TTCGATGTTC
TGA
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| Protein sequence | MNTSLHSPPR RHERVFVVGA TGYIGKFVVR ELVARGYDVV SFARERSGVG SMTRADETRA
QLQGSEVRFG DVSNMESLMK NGICGEHFDV VVSCLTSRNG GVKDSWNIDY QATRNALDAG
KAAGATHFVL LSAICVQKPL LEFQRAKLKF EQELKESGLT WSIVRPTAFF KSIAGQVESV
KKGKPFVTFG NGELTSCKPI SESDLARFIA DCLEDSEKQN KILPIGGPGR AISHKEQGEM
LFELLGRTPK FKYMPIQMFD VIIPLMSLLA KIFPKLQDKA EFARIGKYYC SESMLVLNPQ
TGKYDADMTP SYGSDTLRDF YKRVLKEGIA GQELGEHSMF
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