Gene Ppha_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1105 
Symbol 
ID6462761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1136946 
End bp1137665 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID642727351 
ProductCurli production assembly/transport component CsgG 
Protein accessionYP_002018001 
Protein GI194336207 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000129155 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATTA AATTTTTTCT GATGTTTTTG TTTCTTTTTT CAATCTCTGT TTTTTCTCAA 
GGATTCGCCG AAGAGAAACC TCGTCTTGGG GTATTGAGAT TCACAAACCA CACCTCTGCA
GGATGGTGGG AAGGGAGTGT GGGAACGGAT CTGCAGGATA TGCTCATTGC AGAACTGGCA
TCGACGAACA GTTTTCGAGT ACTCGAAAGG AGAGAACTTG ACGCTGTTCT CAATGAACAG
GATCTGGGTG ATTCCGGAAG GGTAAATCCC AGAACAAGGG CACGATTAGG GAAAATTACC
GGTGCCAAGT ATCTGGTCGC TGCTACACTT TCAGCCTTTG AACAGAACAC AAGCGGTGGC
GGAGGGGGAC TCTCTTTTGG TGGTATCAGT TTGGGAGGCA GGCAGGACAA GGCCTATATG
GCTGTCGACC TTAAAGTGAT TGATGTTGAA ACAGGCGAAA TCTATGATGC CCGGACTGTA
GAGGCCACAT CAAAATCCAG TGGTATCAGC GTAGGTGTAC ACCGTGGAGG CTTTGGCGGT
AACCTTGGCC AGTATCAGAA TACTCCTGTA GGGAAAGCAA TCAGGGCTTG TATCATGGAA
ATAGTCGAGT ACCTGGAGTG CTCTCTGGTA GAAGGAAAGG ATAGTGGTTG CATGGACGAG
TATAGATCGA AGGAAAGATC CAGAAGAGAA AAGACCAAAG GTTCAATTCA ACTAGATTAA
 
Protein sequence
MRIKFFLMFL FLFSISVFSQ GFAEEKPRLG VLRFTNHTSA GWWEGSVGTD LQDMLIAELA 
STNSFRVLER RELDAVLNEQ DLGDSGRVNP RTRARLGKIT GAKYLVAATL SAFEQNTSGG
GGGLSFGGIS LGGRQDKAYM AVDLKVIDVE TGEIYDARTV EATSKSSGIS VGVHRGGFGG
NLGQYQNTPV GKAIRACIME IVEYLECSLV EGKDSGCMDE YRSKERSRRE KTKGSIQLD