Gene Ppha_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1095 
Symbol 
ID6462859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1127746 
End bp1128654 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID642727341 
Productalpha/beta hydrolase fold 
Protein accessionYP_002017991 
Protein GI194336197 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA GAGCAACACT GATCGCCAAG GGAACGTACG CTACGAACGG GAAACAAACC 
TCTCCTGAGA AGCGCTTTAT TGAGGTTAAC GGCTTTAAGG TTCATTACCG GATGGCTGGC
AGCGGAAAGC CGCTCGTGGT ACTGCTGCAT GGCAGTTTTC TGAGTCTCCG CTCATGGCGC
CTCGTATTTG ATGAACTGGC GAAAACAACA ACGGTCCTGG CCTTCGACCG TCCTGCTTTT
GGTTATACCT CACGCCCTCT GCCCTCAAAG GCCACAGGGG TCAGTTACAC TCCTGAAGCC
CAGAGTGACC TCGTTATCGC ACTGATAAAA AAACTTGGTT TCAGCAAAGC GGTGCTGGTT
GGCAATTCAA CGGGGGGCAC CCTGGCGCTT TTGACAGCAC TCCGCCATCC GCAGCATGTT
GAGGGAGTGG TGCTTGCCGG CGCCATGATT TACAGCGGCT ATGCCACCAG TGAAGTTCCT
GCCTTCATGA AGCCTGTCAT GAAAGCCATG ACACCGGTTT TTTCTCGTCT GATGAAATTC
CTCATCACCA GACTCTACGA CCGTAATATT CGCGGCTTCT GGCACAACAA GGAGCGGTTG
GGCGACGCTG TTCTTGCCGA GTTTCGCAGT GACCTGATGC ATGGCAACTG GTCGAGAGCC
TTTTGGGAGC TTTTTTTGGA AACACATCAT CTCCAGTTGG AGAAGCGGCT GAAAACCATG
TCGCTGCCAT CACTCGTCAT TACGGGTGAA CACGACTTGA CCGTCAAAAC AGAGGAGAGC
ATCCGGCTTG CCCGTGAACT TCCCTGTGCT GAGCTGGTAG TTGTACCCGA TTGCGGGCAT
CTGCCACACG AGGAACAGCC TGAAGCCTTT CTTGTGGCCG TCAGGAAATT TTTGAAAAGA
GTCGTTTAG
 
Protein sequence
MPERATLIAK GTYATNGKQT SPEKRFIEVN GFKVHYRMAG SGKPLVVLLH GSFLSLRSWR 
LVFDELAKTT TVLAFDRPAF GYTSRPLPSK ATGVSYTPEA QSDLVIALIK KLGFSKAVLV
GNSTGGTLAL LTALRHPQHV EGVVLAGAMI YSGYATSEVP AFMKPVMKAM TPVFSRLMKF
LITRLYDRNI RGFWHNKERL GDAVLAEFRS DLMHGNWSRA FWELFLETHH LQLEKRLKTM
SLPSLVITGE HDLTVKTEES IRLARELPCA ELVVVPDCGH LPHEEQPEAF LVAVRKFLKR
VV