Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1084 |
Symbol | |
ID | 6462742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1115260 |
End bp | 1115997 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727330 |
Product | hypothetical protein |
Protein accession | YP_002017980 |
Protein GI | 194336186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000238107 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA TTTTTATTGC ACTCCTCATA GTGCTTTTTG CCGCCCAAGG CACACCCGCC GCCGCAGCAT CAAAATTTAC CGGAATCATG GAGATGGCGC TTACCATGCC GAACGGTTCC GCCAAAGTCA CCTACTCATT CGGGAAATCA GCACAACGCA TGGACATGGC CATGCAGATG AACAAAATAC CAGAGCAGCT CAAAACAACC GTGATTACCA AAGCCTCCCA GCCAGACCAG GCTTGGATCA TCAATCACCA GGCAAAAAAA TATAGCCTCG TCAACCTGAA AACCGCCGCC GAAAATGCTA TGCTGCTCGA TTTCGACAGT AACTATACCC TCACCAGGCT CGGAAAACAA TCCATAAAAG GCTATTCCTG TGAACACATC ATCCTGACCA GCACCACCGA AAAACTGGAA CTCTGGATGA CGCGCGACCT GGGTGATTTT TCGACCTTCA GAATCCTTCA GTCACAAAAT CCCCGTCTCT CCAACACAGA GCTTTCAAAA AAACTCAACA GTGAAGGCAT TGAGGGATTC CCCGTCAAGA TCACGCAATA TAACGATAAT GGAAAATACA TGATGGAACT TGTGCAAATC TGGCCAAAAG AGCTCCCTGC TTCCCAATTC GCTGTACCGG CAGGATATCA GAAAGTTGCC GACAACCAGA AGCCTCTCGG AGCGCAGGAG AAAGCACATC TGAAAAACCT TATGGAAAAG ATGAAAAAAT TTGATTAG
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Protein sequence | MKTIFIALLI VLFAAQGTPA AAASKFTGIM EMALTMPNGS AKVTYSFGKS AQRMDMAMQM NKIPEQLKTT VITKASQPDQ AWIINHQAKK YSLVNLKTAA ENAMLLDFDS NYTLTRLGKQ SIKGYSCEHI ILTSTTEKLE LWMTRDLGDF STFRILQSQN PRLSNTELSK KLNSEGIEGF PVKITQYNDN GKYMMELVQI WPKELPASQF AVPAGYQKVA DNQKPLGAQE KAHLKNLMEK MKKFD
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