| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1030 |
|---|
| Symbol | rpmA |
|---|
| ID | 6463603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1065581 |
|---|
| End bp | 1065835 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642727281 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_002017931 |
|---|
| Protein GI | 194336137 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0011666 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATA AAAAAGGTGG CGGATCGACA AAAAACGGTC GCGACAGTAA TCCGAAATAT
CTCGGAGTAA AGGCTGCTGG TGGCTCAACC GTGGCCGCAG GCACAATCAT TCTTCGCCAG
AGAGGCACTG TTATCAAGCC GGGCATGAAT GCTGGTCTTG GACGTGATCA TACCATTTTT
GCTTTGATTG ATGGCGTGGT TACCTTCCGC AACGGACGGA ACAACAAAAA GCAGGTCAAT
ATCCTCCCCT GCTGA
|
|---|
| Protein sequence | MAHKKGGGST KNGRDSNPKY LGVKAAGGST VAAGTIILRQ RGTVIKPGMN AGLGRDHTIF
ALIDGVVTFR NGRNNKKQVN ILPC
|
|---|
| |