Gene Ppha_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1024 
Symbol 
ID6462255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1059200 
End bp1060261 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content50% 
IMG OID642727275 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002017925 
Protein GI194336131 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGA ACAAGCTCTA TTTTGACGGT GGGGAGGAGA TTCGTGATCT CACCATTGTC 
GGCGGTGGTC CTACTGGAAT ATTTGCAGCA TTCCAGTGTG GCATGAACAA TATTAGCTGC
CGTATTATTG AAAGTATGCC TCAGCTTGGC GGGCAGCTTG CAGCGCTTTA TCCTGAAAAA
CATATCTATG ATGTCGCCGG TTTTCCTGAA GTGCCAGCGG CCGGGCTTGT GGAGAGTTTA
TGGAAGCAAA CTGAACGGTA CAATCCGGAA GTAATTCTTG GAGAAACGGT AACCCGGTAT
CGCAAGCTTG ACGACGGTTC ATTCGAGGTT ACCGTCAGTT CTGGCAAGGT TTTTCTTTCG
AGAGCGCTCT TGATTGCTGC TGGCCTGGGT GCCTTCTCAC CCCGCAAGCT GCCCCAGTTG
AACAATATTG ATGATCTTGA AGGTCGGAGT GTCTTTTATG CAGTCAAGAA TATCAGTGAT
TTTGTCGGTC AGCGGGTAGT TATTGTTGGT GGAGGGGATT CTGCTCTTGA CTGGACAGTT
GGTCTTCTGA ATGCTGCAGC CGAGGTGACT CTGGTTCATC GAATGCATGA GTTTCAGGGT
CATGGCAAGA CGGCAAGAGA GGTGCTCGAA GCCAAAGAGA GTGGCCGGGT CAATGTGTTT
TTGAATACTG AGGTACGTTC AGTTGATCGA GAGGGGGAGG TGCTGACGGC AGTTCACCTT
CGCTCAAAAA GTGGGAAGAG CCGCCGTATA GAAGCCGACC GTTTGCTTTT GCTGATTGGC
TTCAAGTCGG ATCTCGGCCC TCTTGCGGGG TGGGACCTCG AACTGGCCGA TAATGCGCTT
GTTGTCGACA GTCATATGAA AACGTCGGTT GACGGGCTCT ATGCTGCCGG TGATATTGCC
TATTATCCGG GCAAGCTTAA AATTATTCAG ACAGGGTTAA GTGATGCGGC AATGGCTGTA
CGCAACAGTT TAACCTATAT CAAGCCAGGT GAGAAGATAC GTCATATGTT CAGTAGTTTG
AAAGGGGCAA AGGAAAAGAG GAATGCACCA GACAACGGTT AA
 
Protein sequence
MTLNKLYFDG GEEIRDLTIV GGGPTGIFAA FQCGMNNISC RIIESMPQLG GQLAALYPEK 
HIYDVAGFPE VPAAGLVESL WKQTERYNPE VILGETVTRY RKLDDGSFEV TVSSGKVFLS
RALLIAAGLG AFSPRKLPQL NNIDDLEGRS VFYAVKNISD FVGQRVVIVG GGDSALDWTV
GLLNAAAEVT LVHRMHEFQG HGKTAREVLE AKESGRVNVF LNTEVRSVDR EGEVLTAVHL
RSKSGKSRRI EADRLLLLIG FKSDLGPLAG WDLELADNAL VVDSHMKTSV DGLYAAGDIA
YYPGKLKIIQ TGLSDAAMAV RNSLTYIKPG EKIRHMFSSL KGAKEKRNAP DNG