| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1011 |
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| Symbol | |
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| ID | 6462654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1047874 |
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| End bp | 1049040 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642727262 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_002017912 |
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| Protein GI | 194336118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.192426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTC TCAGTCTCAG TCAGCACTTC GTCACTCGTC AGAACATGAA AAAAAACCGG
CGCATCTTTT TATCAATTTG TCACATTGTG CTCTGGTTTA CAGTAGTGCC TTTGCTTTTG
GCAGCATGCA GTGGACTCTC TCCAAAGATC ACTCGTACTC CCGCTCCTGC TGAAAGAAGC
TTCCTGATAA ATCAACCAAA AAAAGATCAG AAATTTGCCT CTCCGGCACA AATCGAGAAA
ATCACACCCA TCACCAATTT TGAGTATCGT CTTGGTCCGG GTGATGTTGT CAACATCAAA
ATCTGGCGCA GACCAGAACT ATCACAAGAG GGCATTGTCG TCTCACCCGA TGGCTTGATT
GCCATACCAA GAGTTGGGAG TGTCAATGTA TTAAACCTTA CACAGGAAGA GGTACAAAAA
ATAATCACGG TAAAACTGGA GCCACTGTAC ATTAAACCCG AAGTGACTGT CTGGGTAAGG
GAGTTTCATA ACAATAAGGC ATTTGTCCTC GGACGCGTCG GGAAACCGGG CGTCATCAAT
TTTCCGGGCA AAGGAACACT TCTTGAAGGA CTCGCTCTGG CCGGAGGGCT TCCCGATCAG
GGAAAACTCA CCAGATGTGC CATTATCCGG GGAAGAGAAA ACGTCATCTG GATTGACTTG
CAGGACCTTC TTAAAAACGG AAACATGGCT CTTAATGCCC CGATACTGAA CAATGATGTC
ATCTTTATTC CTGAACTGAA CGATGAACTG ATCTATGTCA TGGGTGAAGT GCTCAACCCC
GGTGCTATCC AGTTGAAAGA CGGAATGAAC GTCCTCAAAG CAATCATGCT TGCGGGAGGG
ATGAACAAAA ACGCAAATGC TGAAAAGGTC TTCGTGATAA GACAACAAAA TGTCAATGGC
GATGTTATCA GGGTAGACTT TAAAAGACTG GTTGAAAGGG GTGATTTCAG TCAAAATTTC
GCTCTATTAC CAGATGATAT TGTTTTTATC AGCCCAACGG GCATGGCAAA ATTCAATTAC
ACTCTCGACA AACTAACTCC CGCGTTACAG ATTCTCAATC TCGGGACTTC TGATGCTGAA
ACGTTCGGAA TTATGGCAAA ATTACGCCAA AACCTCTGGA ATCAAAGTGG ATTTGTCAAC
AGCAGCACAA CAACCACCGG AAATTGA
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| Protein sequence | MQALSLSQHF VTRQNMKKNR RIFLSICHIV LWFTVVPLLL AACSGLSPKI TRTPAPAERS
FLINQPKKDQ KFASPAQIEK ITPITNFEYR LGPGDVVNIK IWRRPELSQE GIVVSPDGLI
AIPRVGSVNV LNLTQEEVQK IITVKLEPLY IKPEVTVWVR EFHNNKAFVL GRVGKPGVIN
FPGKGTLLEG LALAGGLPDQ GKLTRCAIIR GRENVIWIDL QDLLKNGNMA LNAPILNNDV
IFIPELNDEL IYVMGEVLNP GAIQLKDGMN VLKAIMLAGG MNKNANAEKV FVIRQQNVNG
DVIRVDFKRL VERGDFSQNF ALLPDDIVFI SPTGMAKFNY TLDKLTPALQ ILNLGTSDAE
TFGIMAKLRQ NLWNQSGFVN SSTTTTGN
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