Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1009 |
Symbol | |
ID | 6462282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1045692 |
End bp | 1046609 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642727260 |
Product | glycosyl transferase family 8 |
Protein accession | YP_002017910 |
Protein GI | 194336116 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.219691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TTGTTAACAT CGTATTTGCA ACTGACAAGA ACTATATCCA GCACTTGTGC GCTGCATTAA TATCATTACT GGAAAACAAC AAGGATCTCT CTATTGACAT CTACATTCTC AGTAGTGGAA TGTCAAAAAA AAGCTATAGA AACATACAGG AAATCATTGA CAAATATCAT TGTCGACTAA AACATATTAC TATTTCAGAT GAACTTTTTG TCACACTGGC CGTAACACAC CCCTTCTACC CGAAAGGCAC CTATTACCGC CTGCTGATTC CGGAACTTAT TGATACAGAC AAGATACTCT ATCTTGATTC CGACATCATC GTTAACGGCT CAATAAAAGA GTTATATGAA CAGGATCTGG AAGATTATTA TGTCTGTGCG ATTGAAGACC CTGGCTTCGA CAGACATGAG CAATTAAAAA TGAATAAAAA TTCAAAATAT TTCAACTCCG GGATGATGCT TATAAATTTA GCGCTATGGA AAAAAACCGG ACTACAAAAA AAAGTTATCG ATTTTATAGA AAATAACCCG CAAGCGATCT GGTTTCCGGA TCAATGCGGC TTAAATTCAG TTATCAACGG AAAATGGAAA AAAGTTCCAC TAAAATTTAA CCAGCAATCG TCAATATTCA CTCCTTCTTT TGAAACGAAA TTCGATTGCT TCAGCAAATC AGAATTGGAA GAGGCAAGGA AAAATCCGGT AATTATTCAT TATACAAGCG GCTCGAAGCC ATGGCATTCA ACAAATACCC ATCCTTATAA ATATCTCTAT TGGAAATACC TGAAAATGAC AAGATACAAA CATGCAATAT ACTCAGATCT TATGCCGATG CATCTCCTAA AATCAATAAT TCCGGCTGAT TTGAAAAAAC AAATCAAAAC GATCATAAAA AAAGTGTTAT CACGATAA
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Protein sequence | MSDIVNIVFA TDKNYIQHLC AALISLLENN KDLSIDIYIL SSGMSKKSYR NIQEIIDKYH CRLKHITISD ELFVTLAVTH PFYPKGTYYR LLIPELIDTD KILYLDSDII VNGSIKELYE QDLEDYYVCA IEDPGFDRHE QLKMNKNSKY FNSGMMLINL ALWKKTGLQK KVIDFIENNP QAIWFPDQCG LNSVINGKWK KVPLKFNQQS SIFTPSFETK FDCFSKSELE EARKNPVIIH YTSGSKPWHS TNTHPYKYLY WKYLKMTRYK HAIYSDLMPM HLLKSIIPAD LKKQIKTIIK KVLSR
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