Gene Ppha_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0935 
SymbolradC 
ID6460914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp971107 
End bp971775 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID642727189 
ProductDNA repair protein RadC 
Protein accessionYP_002017839 
Protein GI194336045 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.266168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCC ATGATTTTGA CCCGGACAAC CGGCCGAGGG AACGCCTTCT CCGCAGCGGA 
GCGGCTTCGC TCAGCCCGGC TGAACTGCTT GCAATTATCC TGCGCACCGG AACAAAAAAC 
CTCAACATTG TTGATACCTG CAATGAACTG ATTGCCCGGT ACAGCCTTGA AAAACTTGCC 
AATATAACGC TTGAAGAGCT GAAGAAGGTC AAAGGAATCG GAGATGCCAA GGCCATGCAG 
ATTGTAGCTA TTTTCGAACT GAACAAACGA CTCCATTACA GCCGCAATCT TAATAAAAAA 
ATACAGGCTG CACGCGATGT TTTTGAATAC ATGGCAGGAC GGGTTCCGGA TGAAACAAAA 
GAGCATCTCT TTGTACTGCA CCTGAACACC AAAAACCAGA TCATCAAAAC CGAGCTTGTC 
TCTGTGGGAA CACTGAATGC CGCCCTCATT CACCCTCGGG AGGTTTTCAA GTCCGCTATA 
AAAGAGAGTT CCCATGCCAT CATTCTTGTT CATAACCACC CTTCAGGCGA TGTTGAACCG 
AGCAATGCCG ACAAGCAGGT CACCGACCTC CTCAAACAGG CAAGCACAGT CATCCAGATC 
GACCTGCTCG ACCATATCAT TATAGGAAAA ACAGGATGTT TCAGCTTTCG GGAAAGTGGC 
CTTCTCTGA
 
Protein sequence
MRIHDFDPDN RPRERLLRSG AASLSPAELL AIILRTGTKN LNIVDTCNEL IARYSLEKLA 
NITLEELKKV KGIGDAKAMQ IVAIFELNKR LHYSRNLNKK IQAARDVFEY MAGRVPDETK 
EHLFVLHLNT KNQIIKTELV SVGTLNAALI HPREVFKSAI KESSHAIILV HNHPSGDVEP 
SNADKQVTDL LKQASTVIQI DLLDHIIIGK TGCFSFRESG LL