Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0881 |
Symbol | |
ID | 6461072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 922617 |
End bp | 923300 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727136 |
Product | protein of unknown function DUF134 |
Protein accession | YP_002017786 |
Protein GI | 194335992 |
COG category | [R] General function prediction only |
COG ID | [COG1342] Predicted DNA-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.451175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAC CCGTAAAATG CAGAAAAATA GGATGCAATC CGGAGTTTCG GCTTTTTGGA CCTGCTGAAG TTTCGGCAGT CACGCTCGAA ACAGTTGATC TTTCGTTCGA TGAGTTTGAA GCGATCCGGC TTGCAGATTT CGAGGGGTTG TATCAGGATG CTGCGGCTCA ACAGATGCAT GTTTCCCGTC AGACGTTTGG CAATATTCTT GCATCGGCCC GCCATAAGGT GAGCCAGATG CTGGTTTCAG GAAAAAAGTT AACCGTAACA GGAGGAACTA TCATGGTTAC AAGTGAAGAA AGAGTGTTTA AATGTGCAAC CTGCTCTCAT CAATGGAGCG TGGCGCATGG GGTTGAGAGA CCGGCGGTCT GCCCGTCATG TGGGAGTGTA AATATTCATC GACTCACATC CGACGGCAGT TTTGGCGGTG GACGCAATGG AGCTGGAAAA TGCCGAGGTC TTCGTACCGG GCTGAATCGT GAGGGCACGG GTCAGGGAAG CGGCGAGGGA GAAGGCATGG GCCAGGGTTC AGGCGAGGGC GAGGTCCATG GTTCTGGCCG AGGATCAGGT CAGGGCCAAG GCCAAGGTAA GGGACAGGGT CAAGGCCAGG GTCAGGGCCG GGGATTAGGC CAAAGATGCT GCGATTCTCC AGGGCACGTA CATCGCCACG AGGGAGATCA ATAA
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Protein sequence | MARPVKCRKI GCNPEFRLFG PAEVSAVTLE TVDLSFDEFE AIRLADFEGL YQDAAAQQMH VSRQTFGNIL ASARHKVSQM LVSGKKLTVT GGTIMVTSEE RVFKCATCSH QWSVAHGVER PAVCPSCGSV NIHRLTSDGS FGGGRNGAGK CRGLRTGLNR EGTGQGSGEG EGMGQGSGEG EVHGSGRGSG QGQGQGKGQG QGQGQGRGLG QRCCDSPGHV HRHEGDQ
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