| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0878 |
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| Symbol | |
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| ID | 6461075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 918448 |
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| End bp | 919905 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727133 |
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| Product | Homospermidine synthase |
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| Protein accession | YP_002017783 |
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| Protein GI | 194335989 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAATT TTGATAAAAA AATACTCATT ATTGGATTCG GCTCAGTATC CCAATGCACC
GTTCCTGTTC TTTTTAAACA CATTAACGTC GATTATACTC AGGTCACCAT TATGGATTTT
GAGGATATTC GTGAAAAAGT GTCACCGTGG ACAGCATTGG GCGTTACCTA CATTAACCAT
CAAATAACAC CGTATAACAT AGCGCAAACC CTTTCCTCTT ATGTTGCCGA GGGGGACTTG
ATAATCGATT TGGCGTGGAA TATTGATTGT TGTGAAATTC TTCAATGGTG TCATGATCAT
GGTGTCCTCT ATATTAACAC ATCGGTAGAA GTGTGGGATC CTTATACAGG GGTTGAGACC
AGGCCTCCTG CCGAAAGAAC ACTCTACTGG CGGCATATGA ACATCCGCCG CATGACGTCA
CAGTGGAAAG ATAAAGGGGT CACTGCGGTG CTTGAGCATG GCGCCAATCC CGGATTGATA
TCGCATTTTA CCAAACAGGG GTTACTTGAT ATTGCCGACG CAGTCATTGC CCGGAACAAG
GTCGGCCCTG CTCAAGCCGA AATTATTAAA GAGTTGGCTG AAAAAAGAGT CTTTAATGAG
CTGGCTATGG AGCTGGGCGT AAAAGTGATT CATTGCTCTG AAAGGGACAC ACAAATCTCT
GACGTTCCAA AACAGGTTGA CGAGTTTGTC AACACATGGA GTGTTGAGGG ATTCCGTGAA
GAGGGCATGA CAACGGCTGA AATGGGGTGG GGAACCCATG AAAAAGAGCT GCCACAATTT
GCCTATACCC ATACTGATGG GCCAAAAAAC CAGATTTGCC TTGCTAAAAT GGGTATGAAT
ACCTGGGTCT GCTCCTGGGT GCCTGATTAT GATATACGTG GCATGGTAGT GCGGCATGGC
GAAGCGTTTA CGATATCTGA CTATCTCACA GTCTATCAGG AGGGGCAAGC CATCTACCGC
CCAACGGTGC ACTACGCCTA TTGTCCGAGT GATGCCGCCA TTACCTCTCT GCATGAACTG
CGTGGTTATG ATTACAGACT TCAGACCAAT TTCAGGATCA TGAATGATGA GATCACCAAG
GGTTCTGATA TTCTTGGGGC GCTGCTGATG GGTCATCCCT TTAACTCCTG GTGGACAGGT
TCTGACCTGA GTATAGAGCA ATCCAGAGCG CTGGTGCCTC ATCAGAATGC TACGACGATG
CAGGTGGCAA TATCGGTGGT CGCAGCCTGT ATGTGGATGA TCGAAAATCC TGAAAGGGGT
GTTGTTGTGC CGGATAATAT CGACCATGAG TATATTCTTG GAATTGCAAA ACCTTATCTT
GGCAACTTCA TATCAAAAGC TTCCGATTGG ACACCCTTAA AATACAATCC CAACTTTTTT
GCAGGGTTTA ATGCACCGGA TATTGATGAA ACAGATCCCT GGCAGTTCAA GAACTTTCTT
ATTACCGATA ATGATTAA
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| Protein sequence | MINFDKKILI IGFGSVSQCT VPVLFKHINV DYTQVTIMDF EDIREKVSPW TALGVTYINH
QITPYNIAQT LSSYVAEGDL IIDLAWNIDC CEILQWCHDH GVLYINTSVE VWDPYTGVET
RPPAERTLYW RHMNIRRMTS QWKDKGVTAV LEHGANPGLI SHFTKQGLLD IADAVIARNK
VGPAQAEIIK ELAEKRVFNE LAMELGVKVI HCSERDTQIS DVPKQVDEFV NTWSVEGFRE
EGMTTAEMGW GTHEKELPQF AYTHTDGPKN QICLAKMGMN TWVCSWVPDY DIRGMVVRHG
EAFTISDYLT VYQEGQAIYR PTVHYAYCPS DAAITSLHEL RGYDYRLQTN FRIMNDEITK
GSDILGALLM GHPFNSWWTG SDLSIEQSRA LVPHQNATTM QVAISVVAAC MWMIENPERG
VVVPDNIDHE YILGIAKPYL GNFISKASDW TPLKYNPNFF AGFNAPDIDE TDPWQFKNFL
ITDND
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