Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0860 |
Symbol | |
ID | 6461113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 899251 |
End bp | 899796 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727115 |
Product | pyruvoyl-dependent arginine decarboxylase |
Protein accession | YP_002017765 |
Protein GI | 194335971 |
COG category | [S] Function unknown |
COG ID | [COG1945] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00286] arginine decarboxylase, pyruvoyl-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCATTTG TCCCATCAAA AGTTTTTTTC ACCAAAGGTG TGGGAAGGCA CAAAGAATAT CTCTCCTCGT TCGAGCTTGC CCTGAGAGAG GCCAAAATCG AGAAATGCAA TCTGGTTACA GTATCAAGTA TTTTTCCTCC TCACTGTGAG CGCATCAGTG TGGAAGAGGG TGTAAAGCTG CTTTCTCCGG GGCAGATCAC CTTTGCTGTC ATGGCCCGTA ATTCAACCAA TGAGTTCAAC CGTCTTATTG CCGCTTCAGT CGGCGTCGCC ATTCCTGCTG ATGATACACA GTATGGTTAT CTGTCGGAAC ACCATCCGTT TGGAGAGTCC GCCGAACAGT CTGGTGAATA TGCCGAAGAT TTGGCGGCAA CGATGCTTGC AACCACCCTT GGTATTGAGT TTGATCCGAA CAAGGACTGG GACGAACGTG AGGGTATTTA CAAAATGAGT GGAAAAATCA TCAATTCATA CAACATCACT GAAACCGCAG AGGGCGAAAA CGGTCTCTGG ACAACCGTTA TTTCCTGCGC CGTTCTCCTG CCGTAA
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Protein sequence | MSFVPSKVFF TKGVGRHKEY LSSFELALRE AKIEKCNLVT VSSIFPPHCE RISVEEGVKL LSPGQITFAV MARNSTNEFN RLIAASVGVA IPADDTQYGY LSEHHPFGES AEQSGEYAED LAATMLATTL GIEFDPNKDW DEREGIYKMS GKIINSYNIT ETAEGENGLW TTVISCAVLL P
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