Gene Ppha_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0859 
Symbol 
ID6461114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp898452 
End bp899072 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID642727114 
ProductSNARE associated Golgi protein 
Protein accessionYP_002017764 
Protein GI194335970 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATC TTGCCTCATT CCAGAATATT CGTACCCTTG AGGAGTTGAT TCTCTGGGGT 
GGCTATCTGT TGCTCTTTAT CATTATTTTT GCCGAAACCG GCCTGTTTGC AGGCTTTTTT 
CTTCCGGGTG ACTCTCTGCT CATAACGGCA GGGCTTATCG CGGCATCAGG AGCTCTCGAC 
ATCGTCCTCC TGATCACAAT CCTTTCGTGT GGAGCGATTC TGGGTGATAC AACGGGCTAT 
TTTATCGGAA AAAAGCTTAA AAACTCAATC TTTTCAGCAG AGAATTCCCG TTTTTTTCGT 
CGCGAACATT TGCTGAAAAC AGAGGCTTTT TATCGGAAAC ATGGTTCAAA AACGGTGTTT 
CTTGCTCGTT TTGTGCCGAT CGTACGCAGC TTTACGGCGA CTCTGGCGGG TGTGACCGGG 
ATGCCGTTCG GGCTCTTCTT TTTTTTCAGT TTCTGCGGCT CTCTTGTCTG GGTTCTCTGT 
TTTACGCTGA TCGGTTTCTT TATTGCAAGC CTCTTTCCTG ATATTGTTAA ATATCTGCAC 
GCCGTCATCC TTGCAGGAAT AGTCCTTATC GTAGCCACTG CCCTGAAAAG CCTGAGGCAG 
AAAAATAAAG CTGCGCGGTG A
 
Protein sequence
MIYLASFQNI RTLEELILWG GYLLLFIIIF AETGLFAGFF LPGDSLLITA GLIAASGALD 
IVLLITILSC GAILGDTTGY FIGKKLKNSI FSAENSRFFR REHLLKTEAF YRKHGSKTVF 
LARFVPIVRS FTATLAGVTG MPFGLFFFFS FCGSLVWVLC FTLIGFFIAS LFPDIVKYLH 
AVILAGIVLI VATALKSLRQ KNKAAR