| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0831 |
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| Symbol | |
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| ID | 6461186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 868177 |
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| End bp | 871023 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727083 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_002017737 |
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| Protein GI | 194335943 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0795854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTC ATAGGCTCAA TTATTCAGCA GCGGCTGAAA CGAGTCTGCC GGATATCGTT
CTCAAAGGCA TTAATACCCA TAATCTCCGC AATATTTCGG TTTGTATTCC GCGGAATCGT
TTTGTTGTGC TGACTGGTGT CAGCGGATCG GGCAAATCAA GCCTTGCCTT CGATACTCTT
TATGCGGAAG GTCACCGTCG TTATGTGGAA TCCCTGTCAG CCTATGTGCG TCAGTTTCTT
GAACGTATGC CTCGTCCGGA TATTGCAAGT GTTGAAGGAA TTGCTCCGGC AATAGCTATT
GAGCAGAAAC CCATTCCGAA AAATCCTCGC TCTACTGTTG GTACGGTGTC GGAGATCTAT
GACTATCTCC GCCTGCTTTA TGCCCGCATC GGCAAAATTT ATTCTCGTGA TACCAACGAA
CTTGTTTTAA AGCATACTCC CGATGATGTG AGTCTGCAGG CTGGATTTTT TGAGGAGGGC
ACGAAATTTT ATGCCGGTTT TTTTTTCCCG GCTCATCAGG ATGCAGGGCA CCATACTTGT
CCGGTCCAGG ATGAAATAGC AAATCTTCTG AAAAAAGGCT TTTTTCGTGT GGTTGCAGGG
GAGGAGATGC TTGATCTCAA CCAGGAATCG GCCTGCAAGC GGGTGCTTGA GATGCCGAAT
TCCGAACGTT CATCTCTTCT TGTACTCGTC GATCGTTTTG TGGCGCGGCA TGACGAGAAA
GTATTTGGCC GTATTTCACA GGCTGCCGAG AGCTGTTTCA ATGAATCCGG AGGGTATGCT
GTCCTGAAGG TTGTTGGAGG AAAAACCTTC ATTTTCAGTG ATCGGCTTGA ACTGAACGGG
ATTGAATATC AGGAGCCCTC TCCCCAGCTT TTTGCCTTTA ATTCCCCGAT TGGTGCCTGC
ACAACCTGCC AGGGGTTTGG ACGTATTGCC GGTATTGATG AGGATGCAGT GGTGCCAAAC
AAATCACTTT CGCTTGAAGA GGGTGCCATT GCCTGCTGGA ATTCGGAAAA GTATCGCTGG
AATCTCAGGG ATCTTCTTGA CTGTGCGGAT GATCTTGGTA TCCCGATTGA TGTGCCGTAT
GAAAAGCTCT CATACGAGCA GAAGGAGATT ATCTGGAAGG GTACTGCGGA TGAACGGTAT
ACGGGGATCT GGCCCTTTTT TGCTGAAATT GAGAAGGATG CCGGTTATAA AATGCACTAC
CGGGTCTTTT TGAGCCGTTA TCGGGGCTAT GCGACCTGTC CTGATTGCGA AGGGAGCCGC
CTGAATCCTG ATGCAAGGCT TGTCAGGGTT TCGGGCCGTC ATATCGGTGA GGTTTCGCGC
ATGAATATTG CGGATGCCTC CGATTTCTTC CGGAATCTCA ATATTTCACC CTTCGACCGC
AAGGTGGCTG AGGTTATCTT GCAGGAAATT ATCAAGCGCC TTGGTTATCT GCTTGATGTC
GGATTGAACT ATCTCACCCT TGATCGTCTG ACTCATACCT TGAGTGGCGG TGAGTTTCAG
CGTATCAATC TTTCAACATC CCTTGGTTCT CCGCTTGTTG GAGCAATCTA TATTCTTGAC
GAACCGAGCA TAGGGCTGCA CCAGAGTGAT TCTGCACGGT TGATCACGCT GCTCAGAAAG
TTGCGTGACT TGGGTAATAC CGTTGTTGTT GTTGAGCATG ACCGCGAAAT TATTGAGGCT
GCCGACGAAG TTATTGACCT TGGCCCCTAT GCAGGTCGTC TTGGCGGTGA GGTGGTTTTT
CATGGCTCAA TAGCGGCCAT GAAGGAGTCT GGCACCTCTT TGACCGCCCA GTACCTCAAC
GGCAAGAGGC AGATTGTGGT GCCAGTGGTT CGCAGAAAGG TGGATTTCAG CTCCTGCATT
GAAATCACCG GCGCCATGCA GAACAATCTG AAAAATATTA ATGTTCGTTT TCCTCTTGGC
GTCATGACCT GTGTGACCGG TGTGAGTGGT TCAGGCAAGT CCACTCTGGT TAATGATATT
CTCAACAAGG GGATTATGAA GGAAAAGGTT GGATTGAAGG AGAAGGTGGG CACGCACCGC
TCAATTTCGG GAGCATGGCT GGTCGATCGG GTTGAGCATG TTGACCAGTC ACCCATTGGG
AAATCAAGCC GCAGTAACCC CGTTACCTAC CTGAAGATAT TTGACGATAT CCGCACCCTT
TTTGCCCAGA CAAAGGATGC CCGTGAGAGG GGGCTGAAGG CTGGGTATTT TTCCTTCAAT
ATCCCTGGAG GACGTTGCGA AACTTGTGCA GGAGAGGGCA GTGTTCACAT TGAGATGCAG
TTTCTTGCCG ATATAGAGGC TGTTTGTGAG GATTGCAGTG GTCTGCGTTA CAAGGCCGAG
ACCCTCGAAG TGAAGTACAA CGGGCTCTCT ATTGCAGAGG TGCTTGCCCT CACGGTAGAA
GAAGGGATCA CTTTTTTCAG CAAAGAGAGG GGAATTGCAA AAAAACTTCT GGTGCTCGAT
GAAGTAGGGC TTGGCTATAT CAAGCTTGGT CAGTCTTCAA GCACTCTATC CGGTGGTGAG
GCCCAGCGCC TGAAGCTGGC AAGCTTTATT GCCCATGCGG ATGTGGCGCA TACCCTTTTT
ATTTTTGATG AGCCCACAAC CGGTCTGCAT TTTGAGGATA TCAAAAAGTT GATCGGCTGT
TTTGAAAAAC TTCTCGAACA GCACAACACC CTTGTTGTTA TCGAACACAA TCCCGACATC
ATCATGCAGG CCGATTGGGT TATCGACCTT GGCCCGGGAG CTGGTGACAA AGGAGGTGCT
CTTGTTGCGG AAGGAACGCC CGAAGAGATT GCTCTCAGAA AGGACTCTTT GACCGGGCGC
TATCTCCTGC CTTTGTGTGC GCCTTAA
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| Protein sequence | MTTHRLNYSA AAETSLPDIV LKGINTHNLR NISVCIPRNR FVVLTGVSGS GKSSLAFDTL
YAEGHRRYVE SLSAYVRQFL ERMPRPDIAS VEGIAPAIAI EQKPIPKNPR STVGTVSEIY
DYLRLLYARI GKIYSRDTNE LVLKHTPDDV SLQAGFFEEG TKFYAGFFFP AHQDAGHHTC
PVQDEIANLL KKGFFRVVAG EEMLDLNQES ACKRVLEMPN SERSSLLVLV DRFVARHDEK
VFGRISQAAE SCFNESGGYA VLKVVGGKTF IFSDRLELNG IEYQEPSPQL FAFNSPIGAC
TTCQGFGRIA GIDEDAVVPN KSLSLEEGAI ACWNSEKYRW NLRDLLDCAD DLGIPIDVPY
EKLSYEQKEI IWKGTADERY TGIWPFFAEI EKDAGYKMHY RVFLSRYRGY ATCPDCEGSR
LNPDARLVRV SGRHIGEVSR MNIADASDFF RNLNISPFDR KVAEVILQEI IKRLGYLLDV
GLNYLTLDRL THTLSGGEFQ RINLSTSLGS PLVGAIYILD EPSIGLHQSD SARLITLLRK
LRDLGNTVVV VEHDREIIEA ADEVIDLGPY AGRLGGEVVF HGSIAAMKES GTSLTAQYLN
GKRQIVVPVV RRKVDFSSCI EITGAMQNNL KNINVRFPLG VMTCVTGVSG SGKSTLVNDI
LNKGIMKEKV GLKEKVGTHR SISGAWLVDR VEHVDQSPIG KSSRSNPVTY LKIFDDIRTL
FAQTKDARER GLKAGYFSFN IPGGRCETCA GEGSVHIEMQ FLADIEAVCE DCSGLRYKAE
TLEVKYNGLS IAEVLALTVE EGITFFSKER GIAKKLLVLD EVGLGYIKLG QSSSTLSGGE
AQRLKLASFI AHADVAHTLF IFDEPTTGLH FEDIKKLIGC FEKLLEQHNT LVVIEHNPDI
IMQADWVIDL GPGAGDKGGA LVAEGTPEEI ALRKDSLTGR YLLPLCAP
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