| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0821 |
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| Symbol | |
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| ID | 6461217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 855805 |
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| End bp | 857529 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642727073 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC |
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| Protein accession | YP_002017727 |
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| Protein GI | 194335933 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.17374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT TTTTTCGACT GATCGCACTG GTCAAACCAT ATTTCTGGTG GATGGCCCTC
GCCGCACTCA TCGGCTTCGC CACAACCGGC AGCGGCATCG GCCTCCTGAT GACCTCCGCC
TACATCATCG CCAAGGCGGC CCTGCAACCG CCGATGGTCA CCCTGCAACT CGGCATCGCG
GGAGTACGCT TTTTCGGCCT TGCACGGGGA GTCTTCCGCT ACATCGAAAG GCTCATCTCC
CACAACATCA CCTTCAAGAT TCTTGCAAAA CTGCGGTTAT GGTTTTACGA CGCCATTGAG
CCCCTCGCAC CGGCACGCCT CATGCACTTC AAGAGCGGCG ACCTGCTGCA ACGGGTTGTG
GACGACATCC AGAGCCTCGA AAACATCTAC ACCAGAGTGC TTGGCCCACC GCTCACCGCA
CTGCTTGTGG CCGCACTGAT GTGGTTTCTG CTCGGCGTCT ACTCCCTGCA GGCAGCGCTG
CTCATCCTCT GCTTTCACTC CCTTGCAGGC ATTGGCGTCC CGCTCCTCAC CCGGCAGTTG
AGCCGTGGCC TCTCGGTGGG TATCATGAAC CGCAAGGCAG AGCAGCAGGT ACTGGCGCTC
GACCTCTTCC AGGGGATCGG AGAGCTGCAA CTTTACGGAC AACTTCCGGC GCACCTCGCC
GCCATGCAGA GCGCCGAAAG CGGCAAGCTG CAGCTTCAAA GAAAGAACGC CATCATCGAA
GGGCTACACG AATCCCTTAC CGGCCTCCTC ATGAACGGCG CCCTCATCGC CATTCTCTGG
GCGCTCATTC CCTCCATCTC CACCGGCGTG GTCAACGGGA TTTCACTTAC CGTCATCACC
CTCGCCGTCA TGGCCTCGTT TGAACCTTTT CTTCCGCTGC CCTCCACCCT CAAGCACCTC
GAAGCTGATC AGCTCGCCGG AGAACGCCTT TTTGAAATTC TCGATGCCAA GCCGGAAACG
GTCGCCCCGC TCACTCCCCT CCCCTTTCCG GCAGAGCATT CCATTCAGGT TGAGCAGCTC
AGCTTCACCT ACCCCGGCAG CGATACAAAA GCGCTCGACC GCCTCACCTT CACCGTTCTC
CCCGGAGAGC ATATCGCCAT CGTCGGCCCG AGCGGTGCAG GCAAATCGAC CATCACCTCT
CTCTTCATGC GCTTCTGGAA CAGCAGCGAA GGGAGCATCT CCATTGGCGG CCACAACATC
ACCCTCTTCG ACCCTGAAGA GCTGCGCCGC CAGATAGCCC TCGTCTCGCA GCGCACCTAC
CTCTTCGCTG AAACCATCCG CGAAAACCTG ACCCTCGCCG CCCCGGATGC CACCGACGAC
GATCTCAAAA AAGCGCTCAC CGCCGCCGGG CTCAGCCACT TCACCGCAAA ACTCGACGAA
TGGTGCGGTC AGCACGGTAT GAAACTCAGC GGTGGAGAGC GCCAGCGCAT CGCCATTGCC
CGAGTCCTGC TGCAACATGC CCCGATCATG ATTCTTGATG AAGCAACGGC CAACCTTGAC
GGCGTAACGG AGAGAGAGGT AACCCAAACC CTGAACGCCA TCAGCTCAGG AAAAACGCTG
ATAACCATTA CCCACCGCTT AAAGGCAATG GAACAATACG ACCGGATTCT TGTGCTTGAG
AAGGGAAAGA TTGTGGAGCA GGGTCTGCAT AGGGAGCTTA TGGACGGGAA CGGGCTCTAC
CGGAGGATGT GGGAGTTGCA GCATGTGGCG GAGATGACGG GGTGA
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| Protein sequence | MKTFFRLIAL VKPYFWWMAL AALIGFATTG SGIGLLMTSA YIIAKAALQP PMVTLQLGIA
GVRFFGLARG VFRYIERLIS HNITFKILAK LRLWFYDAIE PLAPARLMHF KSGDLLQRVV
DDIQSLENIY TRVLGPPLTA LLVAALMWFL LGVYSLQAAL LILCFHSLAG IGVPLLTRQL
SRGLSVGIMN RKAEQQVLAL DLFQGIGELQ LYGQLPAHLA AMQSAESGKL QLQRKNAIIE
GLHESLTGLL MNGALIAILW ALIPSISTGV VNGISLTVIT LAVMASFEPF LPLPSTLKHL
EADQLAGERL FEILDAKPET VAPLTPLPFP AEHSIQVEQL SFTYPGSDTK ALDRLTFTVL
PGEHIAIVGP SGAGKSTITS LFMRFWNSSE GSISIGGHNI TLFDPEELRR QIALVSQRTY
LFAETIRENL TLAAPDATDD DLKKALTAAG LSHFTAKLDE WCGQHGMKLS GGERQRIAIA
RVLLQHAPIM ILDEATANLD GVTEREVTQT LNAISSGKTL ITITHRLKAM EQYDRILVLE
KGKIVEQGLH RELMDGNGLY RRMWELQHVA EMTG
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