| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0805 |
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| Symbol | |
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| ID | 6461259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 842495 |
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| End bp | 843493 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727058 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002017712 |
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| Protein GI | 194335918 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATAT TTTTGATCTC CTTTTTTGCT TTTCTGGCAG TCATGCTGAT CATGCTGCTG
CTTTATGGGG TGTGGTTCCA CTTTTTCGAT CTCCGCAACC AGGCCAAGAA AAAGCATTTG
CAGGCCATTT ACAATGCCGT TCGCCAAAGT GGGCAAAGCC TCGGCAACGA GCAAACTCCC
CGGCAGGAGA GTGCGATCGA AACCTGGTTC CGTTCACGCT CCAGAACATT TGAAACCTGG
CTCCGTTCAC GTTCCGGAAC ATTGGAAACA CTGCTCCAAC GCGCCCACAC TCCGTTCACT
ATCGGGCGCT TGATAGTCCT CATGCTCGCC TTGTTTACGC TGGTTGTGGT ATTGGGACTT
CTTCTTCTGC CCCAAACAAA CCCCTTGCAC CTGCTCATGC TGGCCGTCGC CATTGCGAGT
ATGCCGGTTC TCTGGTTATT GCGACAGGCC AAACAACGCC GCAAGGTTTT CGGAGATAAA
CTCCCGGAAG CGCTCGATTA CATCTCGCGA GCCATGCGGG CCGGCCACAG TCTGACCTCA
GCCATCGGTA TGGTGGGCAA AGAGCTTCCT GACCCCATCG GTTACGAATT CAAAACCGTC
TTCGATGAAA TTTCTTTCGG CATTCCATTT AAAGACGCGA TCGGTCATCT CGCCGATCGC
ATTCAAAGCA ATGACCTCAA TTTTTTTGTC ATCTCGCTCA AGATCCAGCA CGAAACGGGT
GGCAACCTCG CCGAACTGCT CCATGGATTG GCCAAAACCA TACGAGAACG CGTCAAACTC
CGTGGCAAAG TTCGCACGCT CTCATCCGAA GGGCGCGCAT CAGCCTGGAT ACTGGGCACT
ATGCCATTTG TGTTCGCTGG TATTCTCATG CTCATAAACC CCGGCTACAT CTCGGTGCTC
TGGAGCACTC CCCAAGGCCA GAACCTCATG TTCATCGGTT GTGGGCTCAT GGCTGTTGGC
ATCTTTGTGC TCAGCCGCAT TGTCCAGATC AAGGTTTAA
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| Protein sequence | MTIFLISFFA FLAVMLIMLL LYGVWFHFFD LRNQAKKKHL QAIYNAVRQS GQSLGNEQTP
RQESAIETWF RSRSRTFETW LRSRSGTLET LLQRAHTPFT IGRLIVLMLA LFTLVVVLGL
LLLPQTNPLH LLMLAVAIAS MPVLWLLRQA KQRRKVFGDK LPEALDYISR AMRAGHSLTS
AIGMVGKELP DPIGYEFKTV FDEISFGIPF KDAIGHLADR IQSNDLNFFV ISLKIQHETG
GNLAELLHGL AKTIRERVKL RGKVRTLSSE GRASAWILGT MPFVFAGILM LINPGYISVL
WSTPQGQNLM FIGCGLMAVG IFVLSRIVQI KV
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