| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0781 |
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| Symbol | |
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| ID | 6461313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 814402 |
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| End bp | 819003 |
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| Gene Length | 4602 bp |
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| Protein Length | 1533 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727035 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_002017690 |
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| Protein GI | 194335896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.251608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTA CGTTAAATAC TGGGCTCTAT GATCCTCAGT TCGAGCATGA TGCTTGCGGT
GTAGGGTTTA TTGCCCATAT CAAGGGAGTC AAATCCCATG AAATTGTCGA GCAGGGTTTG
CAGATCAATG AGAACCTCAA GCATCGCGGT GCATGTGGAT GTGAAAAAAA TACCGGTGAC
GGAGCAGGAA TTCTTCTTCA GGTTCCCGAC AAGTTTCTGC GCAGGGTTTG TGCTGATATA
AATATAGATC TTCCCCCCAA GAAGCAGTAT GGCGTAGGAA TGCTTTTTTT GCCGCCGGAT
ATCTCTCAAA GACGCGCTAT TGAAGACATC TGCCGTCAGA TGATTCAGGC CGAGGGGCAG
AAGTTTCTCG GCTTCAGGAA GGTGACAACC TGTAACGATA CTCTTGGCGA AACTGCACGC
TCACAGGAAC CTATTGTCAA GCAGCTTTTT GTTGGCTGGG GCAAGGATAC GCTCTCTGAA
CTGGAATTTG AAAGAAAGCT CTATATCATC CGGCGCCGTA TAACCAAAAG AGTCAAGTAT
ACCGCAGGCC TTCTTGGCAG CAGTTATTTT TACATATCGA GCCTTTCCGG TCGCACGATT
GTTTATAAAG GAATGCTCCT TCCCGAACAG GTAGGGGAGT TCTATCCTGA ACTGCATGAT
GCGGATATGG AGAGCGCCAT TGCCATGGTT CACTCCCGTT TCAGCACCAA TACCTTTCCG
AGCTGGGACA GGGCCCATCC CTATCGCTTT CTCAGTCATA ACGGTGAGAT CAATACGCTG
AAGGGCAACG TCAACTGGAT GAAGGCGAGG GAGAAAAATA TCCAGTCGAA GGTGTTCGGC
AATGCGATTG AGAGTATCAA ACCGATTATT CTGGAGGATG GCAGTGATTC CGCCATTCTT
GATAATACCT TTGAGTTCCT TGTGCTTTCT GGCCGTTCAC TTGCTCATGC AGCCATGATG
ATTATTCCGG AGCCCTGGAC AGGTAATGGC GGGCTCTCGG CTGAGAAAAA AGCCTTTTAT
GAGTATCACA GTTGTCTCAT GGAGCCCTGG GACGGTCCTG CATCAGTAAC CTTTACCGAT
GGCGTACAGA TTGGAGCCGT TCTTGACCGC AATGGACTTC GTCCGTCACG CTATTATATC
ACCAAGGATG ATCTTGTCAT TATGGCATCC GAGGTTGGTG TGCTTGATAT TGCTCCGGAG
CGGATCCTGA AAAAAGATCG CCTGCAACCG GGACGCATGT TTCTGGTCGA TACCGCCCAG
GGACGCATCA TTTCCGATGA AGAGATCAAA GAGAGCATTG CCAGTGAACA ACCCTATCGT
GAATGGATTG AGCGGAACAT GGTCGATCTG GATGCGTTAA CCGATCATCC GCAGTTGAAA
AATCCTGATG AGGATAAATA TAGCCTTACT GCCCGTCAGA AGGTGTATGG CTATACCCAG
GAGGATCTTA TGCTGCAGAT AAAGATAATG AGTGAAAAAG GTGTGGAGCT GGTTGGCTCG
ATGGGCAACG ATACACCGCT TGCTGCGCTG TCTAACAAGC CGAAACTGCT TTACGACTAT
TTCAAGCAGC TTTTTGCCCA GGTGACCAAT CCCCCGATTG ATTCGCTCAG AGAGGAACTG
ATCACTTCCA CAACAGTCAT GCTTGGAACG GAAGGAGGGC TGCTTGAACC CTCAGAGGTT
AACTGCAGAC GCATTCGCCT GCCCCATCCA ATTTTGACCA ATCAGGCCCT CGAAAAGATT
CGTGGTATAG ACAAACCCGG CTTCAGGGCG GTCACCTTGC CGATTTTTTA TGCGGTAAAA
GAGGGTGGAA AGGGTATTGA AGCCGCCATG TACGACCTTT ACCGTCAGTC TGAACAGGCG
GCAAGCAAGG GTGTCAATAT CATTATCATC TCCGACAAGG GAGAGCTTAA TAATGATCGT
GCACCGATTC CAGCGCTTCT TGCTGTATCC GGTCTGCATA ACTTCCTTAT CAATGCTGGT
ATAAGAACAC AGGTTGGCCT TGTTCTTGAA TCGGCTGAGC CAAGGACGGT ACACCACTTT
GCCATGCTCA TCAGTTATGG AGCTGGTGCC GTCAATCCCT ATATGGCGAT TGAGACCGTT
CGTTCGCTGG CTGCGTCGGG CCATATCAAG CTGGATGAGA AGGTTGCCAT AAAGAACTAT
ATAAAGGCTG CCGTCAAGGG TGTGGTGAAG ACCATGGCCA AGATGGGAAT TTCAACAATC
CAGAGCTACC GTGGAGCCCA GATTTTTGAG GCAGTTGGCC TCAATACCCA GCTTGTTGAT
GCCTACTTCA CCCGCACGCC AACCCGTATA GAAGGTATCG GTCTTGATAT TGTTGCTGAA
GAGGTTCGTC GGCGTCATGA AGCGGTTTTT CCGCCCACAG GCAACAAAGT TGACCGCGGG
CTTGAAGCTG GCGGTGAACG CAAATGGCGG CATAGTGGCG AATACCATCT GTTCAGCCCT
GAGGCGATCC ATTTTCTGCA ATACTCCTGC AGAACAGCAG ATTATGAGCT GTTTAAAAAA
TACGAGAACC TTATCGATGA CCAGAGTCAG CATCTCTGTA CCATACGAGG CCTGATGGAT
ATCAGGTTCA GCGATCAGGC CGTGCCGATT GATGAGGTTG AGCCGGTTGA GGCCATTCTG
AAAAGATTCA AAACAGGAGC CATGTCTTAT GGTTCCATAA GCCAGGAGGC TCATGAAACC
CTTGCCATTG CCATGAACAG GCTTGGGGGA AGGAGCAATA CCGGTGAAGG GGGAGAAGAC
CCGGCGCGTT TTAAAAAAGA TGCCAATGGC GATTCGAGAA TGTCGGCCAT CAAGCAGGTC
GCTTCCGGAA GGTTTGGCGT TACCAGCGAA TATCTTGCCA GTGCCAATGA GATCCAGATC
AAGATGGCTC AGGGTGCCAA GCCTGGTGAA GGCGGACAGC TTCCAGGCTC CAAAGTCTAT
CCCTGGGTAG CCAAGGTGCG TCATTCAACA CCGGGCGTCG GTCTGATTTC TCCTCCGCCC
CACCATGATA TCTATTCTAT TGAGGATCTG GCGCAGCTTA TTCATGATTT GAAAAATGCC
AATCCGGTTG CCCGTATCAA CGTCAAGCTG GTCTCCACCG TTGGTGTCGG CACTATCGCC
GCCGGTGTGG CCAAGGCCCA TGCGGATGTT GTGCTCATCA GTGGCCATGA TGGCGGAACC
GGTGCATCGC CAGTTTCAAG CATTATGCAT GCAGGTATGC CGTGGGAGCT TGGTCTTGCT
GAGGCCCACC AGACCCTTGT GCTCAATAAT CTGCGTAGCA GAATTGTTGT TGAAGCGGAC
GGTCAGTTGA AAACCGCACG TGATATTATT ATTGCAGCAA TGCTGGGCGC TGAAGAGTTC
GGTTTTGCCA CTACCACGCT TGTGGTGATG GGATGCATCA TGATGCGTTG TTGCCAGGAT
GATTCCTGCC CGGTTGGTGT AGCTACCCAG AATCCGGAAC TGCGCAAACA TTTCAAGGGT
AAACCGGAGC ATGTTGAAAA CTTCATGCGC TACCTTGCTG AAGGTGTGCG CGAATATATG
GCACGTCTTG GTGTGCGTAC CCTGAACGAA CTCGTCGGAC GCACTGAGTT ACTGAGTATG
AAGAAATCTG TCGATCACTG GAAGGCACAG GGTATTGATC TTTCCAAGAT TCTCTATCAG
GCCGAAGTGG GTGAGGATGG AGTGCGCTAC TGCACCATCA AACAGGAGCA TGGTCTCAAT
GATAGTCTTG ATCGCACGAC CCTGCTCTCT ATCTGTGAGC CAGCCATAAA AAGAAAAGAG
CGGGTTGTCT CCACGCTTCC GATTCGAAAT ACGAACAGGG TTGTCGGCAC CATTGTCGGG
TATGAAGTGA CGAAAGCATA TGGCTCTGCC GGATTGCCGG ACGATACGAT TCACCTGAAA
TTTGTTGGTT CAGCCGGTCA GAGCTTTGGT GCCTTTATTC CCAATGGCAT CACTCTTGAG
CTTGAAGGCG ATGCTAACGA TTATGTGGGC AAGGGACTCT CCGGTGGCCG GATTATTGTC
TATCAGTCAC AAGGTTCCTC TTTCCTGCCG GAAGAGAATA TTATCATCGG CAACGTCGGA
TTCTATGGAG CAACCTCAGG CGAGGCCTTT ATCAGGGGAA TGGCCGGAGA GCGCTTCTGT
GTTCGCAACA GTGGTTTGAA TGCTGTGGTT GAGGCGATTG GAGATCATGG CTGTGAATAC
ATGACCGGTG GAACTGTGGT CATTCTTGGC AAAACAGGCA GGAACTTTGC GGCAGGTATG
TCGGGCGGTA TTGCCTATGT CTACGATGTT GATGGTACAT TTGCCGGCAA CTGTAACCGT
GAGATGGTCG ATCTCTCTGC CATTGATGAT CCAATGGAGC TTGCATCACT TCAGTCGATG
ATTGAAAGGC ATGTCGACTA TACCGGCAGC CATCTTGGTC AGACCATTCT TGATGACCGG
GATGCTCTTC GCAAGCGTTT CGTCAAAGTG ATGCCACAAG ATTACCGCCG TGCTCTTGAA
GCCATGAAAG TAGTTGAGGC TGCAGGGCTC AGTGGCGATG AAGCGGTTAT GGCTGCATTT
CATAAAAATA TTCATGATCC GGCACGAGTT TCAGGGAATT AA
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| Protein sequence | MNVTLNTGLY DPQFEHDACG VGFIAHIKGV KSHEIVEQGL QINENLKHRG ACGCEKNTGD
GAGILLQVPD KFLRRVCADI NIDLPPKKQY GVGMLFLPPD ISQRRAIEDI CRQMIQAEGQ
KFLGFRKVTT CNDTLGETAR SQEPIVKQLF VGWGKDTLSE LEFERKLYII RRRITKRVKY
TAGLLGSSYF YISSLSGRTI VYKGMLLPEQ VGEFYPELHD ADMESAIAMV HSRFSTNTFP
SWDRAHPYRF LSHNGEINTL KGNVNWMKAR EKNIQSKVFG NAIESIKPII LEDGSDSAIL
DNTFEFLVLS GRSLAHAAMM IIPEPWTGNG GLSAEKKAFY EYHSCLMEPW DGPASVTFTD
GVQIGAVLDR NGLRPSRYYI TKDDLVIMAS EVGVLDIAPE RILKKDRLQP GRMFLVDTAQ
GRIISDEEIK ESIASEQPYR EWIERNMVDL DALTDHPQLK NPDEDKYSLT ARQKVYGYTQ
EDLMLQIKIM SEKGVELVGS MGNDTPLAAL SNKPKLLYDY FKQLFAQVTN PPIDSLREEL
ITSTTVMLGT EGGLLEPSEV NCRRIRLPHP ILTNQALEKI RGIDKPGFRA VTLPIFYAVK
EGGKGIEAAM YDLYRQSEQA ASKGVNIIII SDKGELNNDR APIPALLAVS GLHNFLINAG
IRTQVGLVLE SAEPRTVHHF AMLISYGAGA VNPYMAIETV RSLAASGHIK LDEKVAIKNY
IKAAVKGVVK TMAKMGISTI QSYRGAQIFE AVGLNTQLVD AYFTRTPTRI EGIGLDIVAE
EVRRRHEAVF PPTGNKVDRG LEAGGERKWR HSGEYHLFSP EAIHFLQYSC RTADYELFKK
YENLIDDQSQ HLCTIRGLMD IRFSDQAVPI DEVEPVEAIL KRFKTGAMSY GSISQEAHET
LAIAMNRLGG RSNTGEGGED PARFKKDANG DSRMSAIKQV ASGRFGVTSE YLASANEIQI
KMAQGAKPGE GGQLPGSKVY PWVAKVRHST PGVGLISPPP HHDIYSIEDL AQLIHDLKNA
NPVARINVKL VSTVGVGTIA AGVAKAHADV VLISGHDGGT GASPVSSIMH AGMPWELGLA
EAHQTLVLNN LRSRIVVEAD GQLKTARDII IAAMLGAEEF GFATTTLVVM GCIMMRCCQD
DSCPVGVATQ NPELRKHFKG KPEHVENFMR YLAEGVREYM ARLGVRTLNE LVGRTELLSM
KKSVDHWKAQ GIDLSKILYQ AEVGEDGVRY CTIKQEHGLN DSLDRTTLLS ICEPAIKRKE
RVVSTLPIRN TNRVVGTIVG YEVTKAYGSA GLPDDTIHLK FVGSAGQSFG AFIPNGITLE
LEGDANDYVG KGLSGGRIIV YQSQGSSFLP EENIIIGNVG FYGATSGEAF IRGMAGERFC
VRNSGLNAVV EAIGDHGCEY MTGGTVVILG KTGRNFAAGM SGGIAYVYDV DGTFAGNCNR
EMVDLSAIDD PMELASLQSM IERHVDYTGS HLGQTILDDR DALRKRFVKV MPQDYRRALE
AMKVVEAAGL SGDEAVMAAF HKNIHDPARV SGN
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