Gene Ppha_0770 details

Gene Information

• Locus tag: Ppha_0770
• ID: 6461331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 802790
• End bp: 804760
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642727024
• Product: ABC transporter related
• Protein accession: YP_002017679
• Protein GI: 194335885
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.920342
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCAA TGCTTGAACT TGTTGATGTT TACCGCACCT ACCAGATCGG CGAAAGTACC 
GTTCAGGCGT TACGTGGTGT TTCAGTAACT ATTGAAAGGG GTGAGTTTGT TGCCATTATG 
GGCGCTTCGG GATCAGGCAA ATCATCGCTT CTTCAAATTC TCGGACTCCT CGATAACCCC 
GACAAGGGGG ATTCTCTGAT TTTCGGAAAA AATGTCAACA CGCTCTCTGA AGATGATCAG 
GCTGGTGTGC GCAATAATGT TGCCGGGTTT GTCTTTCAGC AGTTTCACCT GCTTAAGCGG 
ATGAGCATTC TGGAGAATGT ACGTCTACCC CACATTTACA GCGGACTTAA AGGAGATTTT 
CATCAGGAAG CGATAGAGAG GCTCAGGCAG GTTGGACTTG AAGAGAGAGT TGATCATACG 
CCGAACCAGC TTTCAGGCGG AGAGCAGCAG CGCGTTGCGA TAGCCAGGGC GCTGATTCGC 
GATCCGCTGA TCATTTTTGC TGACGAGCCT ACCGGAAACC TTGATTCAAA AAACTCTGCC 
GAAATCATGA AGATTTTTAA AGCTCTTCAT GAACAGGGTA AAACCGTCAT CATGGTTACG 
CATGAAAATG ATATTGCGGC CTATGCAGGT CGAGTTATTA CCATGAAGGA TGGGCTCATT 
ATCAGCGATG AACGTAAGGC AGGATTTAAG CCATCAGAAG CATCTTCCGG AGAGGCCGGG 
TTTGAGCTGC ATGACTCCAA GGTTTCCCTA TGGCAGGATG GCCGGTTCAG CGGGTTTATG 
GCGCAGGCAT TTCAGTCCAT TCTTGCCAAT AAGATGCGCT CTTTTCTCTC CGTGCTCGGT 
ATTCTGGTTG GGGTTGCCTC GGTGATCGCT ATGATGGCGC TCGGTGAAGG CGCAAAAGCT 
GCCATGCAGG AGCAGTTGAA ATCCATGGGT TCGAACATGC TTTCGATCAG AGGAGGATCG 
GCCAAGATCC GTGGTGCTGC ACAGGGGGCT GGTGCCGTTG CGCGGTTTAC CGCTGTCGAT 
GTAACTGACA TCTCTTCACT CCACACACTG GTTAAAAATG CTGCAGGAGT TGTCAATGGC 
AGCGCCCGGA TAGTTTACGG CAACAAAAAC TGGAGTTCAA CCCTTACCGG GGTTGGCTTC 
GATTATGGTA CCATGCGTGC CGCGATACCT GTTCTCGGCA GGTGGTTTAC TCCTGAAGAG 
ATGCAAAAAC GTGAAAAATC TGCTATTATT GGCGTGACGG TGGTAAAGGA GCTTTTTGGT 
AACAGTAATC CGTTGGGCAA AACGATCAAG ATCAACCGTA TTAATTTCAA GGTTATCGGT 
ATTGCTCCGC CAAAAGGGTT TTCAGGACCA CAGGATGAAG ATGATGTGGT GATCATACCG 
GTAACAACTG CCATGTATCG TGTGCTTGGA AAGGATTATT TCAGCGGCAT CTTTGTTGAG 
GTTGCTTCAC CCACCCTGAT TGAACAGGCC AAAACGGCTG TCAGTCAGCA GATTCGAAAA 
AGGCATCGGC TGAAAGCGGA CGATGATTCA TTCAATATCA GGGATATGAC AGAAATACAG 
AAGATGCTTA CCAGCACAAC GCAGACCATG AGTCTCCTGC TCGGTTCTAT TGCGGCGATT 
TCGCTTCTTG TGGGAGGTAT CGGGATTATG AATATTATGC TTGTTTCCGT AACCGAACGA 
ACCAGAGAGA TTGGTCTGCG TAAAGCTATT GGGGCGAGAA AAAAAGATAT CATGATGCAG 
TTTCTGGTCG AATCGGTTGG TTTGACCATC AGCGGAGGCT TTATAGGGGT TCTTGCCGGT 
GTTGGTATAT CACTTCTTCT CTCCCTCTTT GCTGGCTGGG CGGTAAAAAC ATCCCTGATA 
TCGGTGCTGC TTGCAACGAC TTTTTCTGCA GTTATCGGTA TGTTTTTTGG TCTTTGGCCT 
GCCAGAAAAG CTGCAGAACT TAAACCGCTT GAAGCTCTTC GCTATGAATA G 

 

Protein sequence

MKPMLELVDV YRTYQIGEST VQALRGVSVT IERGEFVAIM GASGSGKSSL LQILGLLDNP 
DKGDSLIFGK NVNTLSEDDQ AGVRNNVAGF VFQQFHLLKR MSILENVRLP HIYSGLKGDF 
HQEAIERLRQ VGLEERVDHT PNQLSGGEQQ RVAIARALIR DPLIIFADEP TGNLDSKNSA 
EIMKIFKALH EQGKTVIMVT HENDIAAYAG RVITMKDGLI ISDERKAGFK PSEASSGEAG 
FELHDSKVSL WQDGRFSGFM AQAFQSILAN KMRSFLSVLG ILVGVASVIA MMALGEGAKA 
AMQEQLKSMG SNMLSIRGGS AKIRGAAQGA GAVARFTAVD VTDISSLHTL VKNAAGVVNG 
SARIVYGNKN WSSTLTGVGF DYGTMRAAIP VLGRWFTPEE MQKREKSAII GVTVVKELFG 
NSNPLGKTIK INRINFKVIG IAPPKGFSGP QDEDDVVIIP VTTAMYRVLG KDYFSGIFVE 
VASPTLIEQA KTAVSQQIRK RHRLKADDDS FNIRDMTEIQ KMLTSTTQTM SLLLGSIAAI 
SLLVGGIGIM NIMLVSVTER TREIGLRKAI GARKKDIMMQ FLVESVGLTI SGGFIGVLAG 
VGISLLLSLF AGWAVKTSLI SVLLATTFSA VIGMFFGLWP ARKAAELKPL EALRYE