Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0691 |
Symbol | |
ID | 6461531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 711108 |
End bp | 712910 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726948 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002017603 |
Protein GI | 194335809 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC AAGGTACAAA GAGGATTTTC GCGACCTGCA GGCTTGGATG CGGCCTGTTG CTTGCTGCGT TTGTGCTTTT TCTCTCTTCC TGCAACCGCC ACAACGGAAG TTCCGGTGAG GCTGGAACAA GAGGTGGGGC AATGGATTCC ACACTTGTTA TTGCCATGCT TGGTGATGCC GATTATCTTA ACCCCGTGCT TGGCAGCACC GTTACTTCAG GCAATATTAT TGGACTTATC TATCCATCTC TCTTGCAGAG TGAGTTTGAC ACCTCGACCG GGCTTTTGAA CTATATGGCT CTTGAAAAAA AACTGCGGGA AGTAATGCCC GGTCAGGGGA AAAAAACACC GAAAGGGGCC ATTGCAAAGA GCTGGCAGAT GTCGGCGGAT CAGAAATCCA TTACCTACAT TCTCAGAAAT GATGCTTTCT GGAATGACGG CAAGCCTGTT GTTTCAGGGG ATTTCAAGTT TTCCTACCAG TTGTATGGCA ATCCGGTGAT CGCCAGCGCC CGTCAGCAGT ACCTGGCTGA GTTGGTTGGT GCCGACAAGG GAAAGGTTGA TTTCGACAAA GCCATTGAGA CTCCTGACGA TACCACCCTT GTCTTCAGGT TTTACAAGCC TGTTCCGGAA CATCTGGCAC TTTACCATAC ATCATTGACG CCCCTTCCGG CTCATCAGTG GAAAAATGTC AAGCCTGACG AATTCCGTCA CTCACCGCTT AATCTCGAAC CGCTTGGGGC AGGCCCCTAT AAACTGAAGA GCTGGAAGCA GCAGCAGGAA ATTGTACTCG CATCAAGCCG GAGCTCGAAT CTCCCGAAAC CCGGAACCAT TCCGCTGATT ACCTTCAGGG TTGTGCCCGA TTATACGGTC AGGCTGGCGC AGCTTCAGAC CGGTGCGGTG GATGTTGTTG AAAATATCAA ACCGGAAGAT TTTACGGCTC TTCTGAAGGC CAATAGGCAG ATTGATGTCA AAACGATTGG TCTGAGGGTC TATGATTATG TTGGCTGGTC AAATATCGAC CAGAATGAGT ATCACAAAAG TGGCAGGGTC ATGCCTCACC CCCTGTTCGG TTCGGCGCGT GTTCGGCTTG CCCTGACGCA AGCCATTGAC CGCGAAGCGA TCATTGACGG CTATCTCAAG CAATATGGGG TAATTTGTAA CACCGATATT TCACCATCAC TGAAATGGGC CTATAATGAA CGGGTTGCGC CGCATGCCTT CGATCCTGCA CGTGCTTCAG CCCTGCTGAA GGCTGAGGGC TGGACGCCTG GGCCGGATGG TATTTTGCAG AAACAGGGCA GAAGGTTCAG TTTCGTGCTC TATACCAATG CCGGTAATGC GAGAAGGAAC TATGCAAGTG TTATTATTCA GCAGAATCTG CGCTCAATCG GTATCGACTG CAAGCTTGAG GTTCAGGAAT CCAATGTCTT TTTTGAAAGT CTCCAGGAGA GAAAGCTTGA TGCATGGATG GCTGGATGGT CCATTGGTCT GGAGATTGAT CCTCTTGATG TCTGGGGTTC CGATCTTAAC AAGAGCCGTT TTAATTTTAC CGGTTACCGC AATCCGAGGA TAGACGAGCT CTGTGAGCTT GCCAAGCAGA AGATGGAACC CACGGGGGCA AGAGCGTACT GGCTTGAATA TCAGGAGATT ATACATCGTG ATCAGCCGAT CACCTTTCTC TACTGGATCA AGGAGACGCA GGGCTTCAGC AAGAGGATTG AGGGGGAAGA GCTCAATATT TCAGGTGCTT TTTATAATAT TGACGACTGG AGGCTGCGTC CTTCAGCCAA TGTTGCACTA TAG
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Protein sequence | MSKQGTKRIF ATCRLGCGLL LAAFVLFLSS CNRHNGSSGE AGTRGGAMDS TLVIAMLGDA DYLNPVLGST VTSGNIIGLI YPSLLQSEFD TSTGLLNYMA LEKKLREVMP GQGKKTPKGA IAKSWQMSAD QKSITYILRN DAFWNDGKPV VSGDFKFSYQ LYGNPVIASA RQQYLAELVG ADKGKVDFDK AIETPDDTTL VFRFYKPVPE HLALYHTSLT PLPAHQWKNV KPDEFRHSPL NLEPLGAGPY KLKSWKQQQE IVLASSRSSN LPKPGTIPLI TFRVVPDYTV RLAQLQTGAV DVVENIKPED FTALLKANRQ IDVKTIGLRV YDYVGWSNID QNEYHKSGRV MPHPLFGSAR VRLALTQAID REAIIDGYLK QYGVICNTDI SPSLKWAYNE RVAPHAFDPA RASALLKAEG WTPGPDGILQ KQGRRFSFVL YTNAGNARRN YASVIIQQNL RSIGIDCKLE VQESNVFFES LQERKLDAWM AGWSIGLEID PLDVWGSDLN KSRFNFTGYR NPRIDELCEL AKQKMEPTGA RAYWLEYQEI IHRDQPITFL YWIKETQGFS KRIEGEELNI SGAFYNIDDW RLRPSANVAL
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