| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0671 |
|---|
| Symbol | |
|---|
| ID | 6461570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 692578 |
|---|
| End bp | 693912 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642726932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002017587 |
|---|
| Protein GI | 194335793 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA GGGGAAAATT CCGTTACACC CTGCTGCTTG CAGGCTCACT CTGCACTGCT
GCACCCTCTT TTGCCGCTGA AAGCACCGAA AGTGTTGACG TGCGCATCAC GCGTCTTGAG
AAGGAGCTTG CCGAACTGAA AGCACTGCTG CAAACCAGGC CTGCTGCCGC AGGAACTGCA
GAAACACCAT CAGCACCCGT AAAAAAAGCT GACCCCCCAG CTCCGGCAAC CGTCTCAACC
AGCTCGGGTG TCAACCTGCA GCTCTACGGT TTTGCCCGTT TGGATGGCTC GTTTGATAGT
GGCCAAATCT ATCCCGGCAA TATCGCCCTG TGGGCCTGGC CTCAGTACGG AAGCAGCAAT
GATCGTGAAT GGAACCTTAC GGCGGGTGCG ACAAGAATCG GCATGAACCT CAGCGGCCCT
GATACGGAGA GCATAAAATT GACCGGCAAT ATTGAGTTTG ATTTTCTCAC TGGCCTTTCA
AGCGAAAACA ACCAGGCCCC TCGCCTGCGT CATGGTTATA TGAAGGCATA CTGGCCTGCC
TCCGATTTCA GCATTCTTGC AGGCCAGAGC TGGGATCTTG TCTCTTCACT GATCCCTTTT
GTGGATGATC CTGCCCTGAT GTGGAGCGCA GGAAATATTG GTTCCCGCCA CCCACAGTTG
CGTCTCACCA AAGGAGTTGC AACCGGAGAA AAAAGCCGCA TGGAACTGGC TGTGGCTGCA
TCGAGAACGA TCGGAGACAA AAACACGACA CCGGGTGTGA TTGCAACGGA TACAGGCAAG
GATGCCACGA TGCCAACCAT TCAGGGACGC ATTGCTCTTT CCCTACCGCT CCTGGTGGAA
AGTCAGCCTG CAACTATTGC CCTTTCGGGC CATTACGGAG AGGAAGAGTG GGACGCCAAT
AACAGTGGCA GTCACAAAAC AGTTGACTCA TGGTCATGCA ACCTGGAACT CTCCATGCCA
TTAAGCAAAA AAATGACGCT GGCGGGAGAG TATTTTACCG GTTCAAACCT CGACGACTAC
TGGGGTGGAA TAAGCCAGGG CGTCAATACC AGTACGCTTA AAGAGATCCG TTCGTGTGGC
GGATGGGCCG CACTCAGGTA CACTTCCAGC CCATCAACCT CTTTCAGCAT TGGAGCAGGG
GTGGACAATC CCAATGATAA CGATCTGGCT CTCGGTGCCC GATCACGGAA TCAGAGCATC
TTTGCCAATG TCATCAATAA AATAACGCCG AATTTGATAC TTGGGCTTCA GCTCTCTGAT
TGGAAAACCG AATACAAGGG AGTGGCTGAA GGCGATGCAA TCCGCGCCCA AAGCTCGTTG
ACCTATAAAT TTTAG
|
|---|
| Protein sequence | MNARGKFRYT LLLAGSLCTA APSFAAESTE SVDVRITRLE KELAELKALL QTRPAAAGTA
ETPSAPVKKA DPPAPATVST SSGVNLQLYG FARLDGSFDS GQIYPGNIAL WAWPQYGSSN
DREWNLTAGA TRIGMNLSGP DTESIKLTGN IEFDFLTGLS SENNQAPRLR HGYMKAYWPA
SDFSILAGQS WDLVSSLIPF VDDPALMWSA GNIGSRHPQL RLTKGVATGE KSRMELAVAA
SRTIGDKNTT PGVIATDTGK DATMPTIQGR IALSLPLLVE SQPATIALSG HYGEEEWDAN
NSGSHKTVDS WSCNLELSMP LSKKMTLAGE YFTGSNLDDY WGGISQGVNT STLKEIRSCG
GWAALRYTSS PSTSFSIGAG VDNPNDNDLA LGARSRNQSI FANVINKITP NLILGLQLSD
WKTEYKGVAE GDAIRAQSSL TYKF
|
|---|
| |