Gene Ppha_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0634 
Symbol 
ID6461681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp633655 
End bp634368 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID642726895 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_002017550 
Protein GI194335756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00137555 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTG CGGTTACTGT TGGCAAGAGA GAGTTGGTGG TTGATGATGT GGTGTCGTTG 
CTTGCAGGTC ATAACTTGTG GCCGCAACTG ATGGAGGGCG TGGTTGTTGA CAGGGTTTTA
CGTACGCTTG GGTGCAGTGA GGAAGAGATC GGGGTTTATT ATACGACCGA ACTTGCTGCT
GATGCTGTTT TTCTTGAAAA AAAACGGGCT CAATTGCTTC TTGACGGGGC GAAGGAGGAG
GATGTTGATT TTTTTATCAG TCGTCCCGTT TTGCTGGAGC TTTTCAAGAG GCGGCGGTTT
GAGCCTCTGG TTGGCAGCGC TTTCCTGAAG TTGAAAGCTG GTATGGACAA GGTTCTCTTT
TCTCTGTTGC GCAATAAAGA TCATGAGCTG ACAAGAGAGC TGTTTTTTCG CCTCGAATCA
GGAGAGGAGT CGTTTGCCTC TCTTGCAGCC CGTTATGCCG AGGGCCGGGA GGCGTTGAGT
GGCGGTCGCC TCGGCCCGAT TGAGATGCAA CAGTTAAATC CTGCATTGGC TGCGGTGCTC
TCGACGGCCA GGCCGGGGGT TGTGAATCCT CCGGTTGTCA TTGACGGATT GGGAGTTATT
ACCTTGCTGC ATGAGAAAAT ACCGGCAAAA TTTGATGAAC CGATGAAACA GCATCTTCTC
AATCACCTGT TTCGTGAATG GGTGAAGGCT GAGGTATTGG CTTTTTTTTA CTGA
 
Protein sequence
MSVAVTVGKR ELVVDDVVSL LAGHNLWPQL MEGVVVDRVL RTLGCSEEEI GVYYTTELAA 
DAVFLEKKRA QLLLDGAKEE DVDFFISRPV LLELFKRRRF EPLVGSAFLK LKAGMDKVLF
SLLRNKDHEL TRELFFRLES GEESFASLAA RYAEGREALS GGRLGPIEMQ QLNPALAAVL
STARPGVVNP PVVIDGLGVI TLLHEKIPAK FDEPMKQHLL NHLFREWVKA EVLAFFY