| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0628 |
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| Symbol | |
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| ID | 6461695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 603068 |
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| End bp | 605908 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642726890 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_002017545 |
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| Protein GI | 194335751 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00420519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA GCCATATCAA CATCCGGGGA GCACGAGTCC ACAATCTCAA AAACATCTCC
CTCGACATTC CACGCAACAA ATTTGTTGTC ATAACCGGCC TCTCAGGATC GGGAAAATCA
AGCCTCGCCT TCGACACCAT CTACGCCGAA GGTCAGCGCC GCTTCATGGA AACACTCTCG
CCCTACGCCC GCCAATACAT CGGCAGCATA GAACGCCCCG ACGTTGACTA TATCGAAGGA
CTCTCACCCG TCATCTCCAT CGACCAGAAG AGCACCAACC GCTCACCCCG GTCAACAGTC
GGCACCATCA CCGAAATTCA CGACTTTATC CGTCTCCTCT ACGCCAAAGC AGGACGACGC
TACGACCCCG TCACCGGCGC CATGCTCCAG CAGCAAAGCG AAGAGAGCAT CGGCGAAGCC
ATACTCGCCC TCCCACAAGG CACCAAAATA CAGATACTCT CCCCCCTCGT CACCGGACGC
AAAGGGCACT ATCGCGAACT CTTCGAACGA CTCCTCCTCA AAGGCTTTCT CAGGGTCCGC
ATCGACGGAA AATACCGCGA AATGGAAAAG GAGATGCAGA TCGAACGCTA CAAAAGCCAC
TCCATAGAAC TCGTAGTCGA CCGCCTGGTC ATCAGCCCCG ACTGCGAAGA TCGCCTCAGA
GACGCAATCA GCATGGCCAT AACCATGTCA GAACACCGCT CAACCGTCAT CTGCGACCCG
ATGGAGAGCC AGCTCAAAGA GCTCACCTTC AGCACACGCT ACGCCTACTC CGACGGCTCC
GTACCCGTCG ACACCCTTGC GCCAAACCAC TTCAGCTTCA ACTCCCCCTA CGGCGCATGC
CCTGAATGCA ACGGCCTCGG AGAGCTCATG CAGCTTTCAG GAGAGCTGAT GACCCCCGAC
CTCACCCTCT CGCTCAACGA CGGCGGGCTC GACCCATTCG GAAAATCAGG AAAACGCAAC
CTCTGGCAAG TCATCAGGGC AATCGCAAGA GAGTTCAACT TCACCCTCGA CACCCCATTG
ACCGACATTC CACAAGAGGC AATGAAAATC CTTCTCGAAG GATCCGGCAC CCGAACCTTC
GACGTCAGCT ACAGCTACTC CGGCCACGAC ACCCTCTACC CGCAACCCTT TCCCGGAGCC
CTCCCCTACG TCGAAGAGAT CCTCAAAAAT GCCAGCTCCT CAAAAATACG CGAGTGGGCC
GAAAACTACA TGCTCCGCAA ACCATGCCCC TCATGCAAAG GAGCAAGACT GCGCAAAGAG
AGCCTGCTGG TCAAAATAAA CGAGATCAAC ATAGCACAGG CAGAATCACT CACCCTGCCC
GAATCCCTCG CCTTCTTCAA GGCGCTCCCC GGCAACCTCA GCACAAAAGA GCAACTTGTT
GCCACACCCA TACTGCACGA AATCGTCAAA CGCCTTGAAT TTCTCCTCAA CGTCGGGCTC
AGCTACCTCT CAATCGACCG CAGCTCACAA ACACTCTCCG GCGGCGAAGC ACAACGCATA
CGACTCGCCT CACAGCTCGG CTCACAACTC AGCGGCGTCC TCTACGTCCT CGACGAACCA
AGCATCGGAC TCCACCAGCG CGACAACCAC AAACTCATCA CCTCACTCAA ACGGCTCAGA
GACCTCGGCA ACACCGTCCT CGTCGTCGAA CACGACAAAG AGACCATGCT CGAAGCCGAC
GAAATCATCG ACCTCGGACC AGGAGCAGGC GAATACGGCG GAGAAATAGT CGCCCAGGGA
GCCGCCGCCA CCCTCGACCC CAACTCACTC ACCGCAGGAT ACCTCAACGG AGAACGGCAG
GTATACTGCA AAAAAGAGGA AAAAACAGAC CCTGAGGAAC AACAATTCCT GCGGCTCAAA
GGGTGCCGGG GCAACAACCT CAAAAACATC GACATCACCA TTCCCCTCCG CTCACTCGTC
AGCATCACCG GAGTCAGCGG ATCAGGCAAA TCCACCATCA TCAACGAAAC CCTCTACCCA
ATCCTTGCGC GCCACTTCTA CCGCTCCAAA CTGCACACCT ATCCCTACGA CAGCATCGAA
GGCATAAAAC AGCTCGACAA AGTAGTCAAC GTCGACCAAT CACCCATAGG CCGCACTCCC
CGCTCCAACC CCGCAACCTA CACCGGAGCC TTCACCTTCA TCCGCGACTT CTTCACCCGC
ATGCCCGAAG CGCAGATCAG AGGATACAAA GCCGGAAGGT TCAGCTTCAA CGTCAAAGGA
GGACGATGCG AAGTGTGCCA GGGAGCCGGA ACCCGAAAAA TCGAAATGAA CTTTCTTCCC
GACGTCTACG TCCAATGCGA AAACTGCAAG GGAGAACGCT ACAACCGCGA AACCCTGCTC
GTCAAATACC GAGGAAAATC CATCGCCGAT GTACTCGAAA TGACCATCAC CGAAGCCGCA
GAATTCTTCA CCGACTTCCC CCGGATACTG CGCATCCTCA CCACCATGCA AAGCGTCGGA
CTCGGCTACC TCAAGCTCGG CCAACCCTCC CCCATGCTCT CAGGCGGAGA GGCACAACGC
ATCAAACTCT CGGCAGAACT CGCCAAAATA CAGACCGGCA ACACCCTCTA CATCCTCGAC
GAACCCACAA CCGGACTCCA CTTCCAGGAC ATCCAGCACC TGCTCGAAGT ACTCCGCAAA
CTCGTCGACA AAGGCAACAG CGTCATCATC ATCGAACACA ACCTCGACAT CATCAAAAAC
AGCGACTGGA TAATCGACAT CGGCCCCGAA GGAGGCAACG AAGGCGGCAA CATCATCGCC
GAAGGCACCC CCGAACAGAT TGCCCAAACA GAACACTCCT ACACCGGCCA ATTTTTAAAA
GCAGAGATGG GAATAGTGTA A
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| Protein sequence | MEFSHINIRG ARVHNLKNIS LDIPRNKFVV ITGLSGSGKS SLAFDTIYAE GQRRFMETLS
PYARQYIGSI ERPDVDYIEG LSPVISIDQK STNRSPRSTV GTITEIHDFI RLLYAKAGRR
YDPVTGAMLQ QQSEESIGEA ILALPQGTKI QILSPLVTGR KGHYRELFER LLLKGFLRVR
IDGKYREMEK EMQIERYKSH SIELVVDRLV ISPDCEDRLR DAISMAITMS EHRSTVICDP
MESQLKELTF STRYAYSDGS VPVDTLAPNH FSFNSPYGAC PECNGLGELM QLSGELMTPD
LTLSLNDGGL DPFGKSGKRN LWQVIRAIAR EFNFTLDTPL TDIPQEAMKI LLEGSGTRTF
DVSYSYSGHD TLYPQPFPGA LPYVEEILKN ASSSKIREWA ENYMLRKPCP SCKGARLRKE
SLLVKINEIN IAQAESLTLP ESLAFFKALP GNLSTKEQLV ATPILHEIVK RLEFLLNVGL
SYLSIDRSSQ TLSGGEAQRI RLASQLGSQL SGVLYVLDEP SIGLHQRDNH KLITSLKRLR
DLGNTVLVVE HDKETMLEAD EIIDLGPGAG EYGGEIVAQG AAATLDPNSL TAGYLNGERQ
VYCKKEEKTD PEEQQFLRLK GCRGNNLKNI DITIPLRSLV SITGVSGSGK STIINETLYP
ILARHFYRSK LHTYPYDSIE GIKQLDKVVN VDQSPIGRTP RSNPATYTGA FTFIRDFFTR
MPEAQIRGYK AGRFSFNVKG GRCEVCQGAG TRKIEMNFLP DVYVQCENCK GERYNRETLL
VKYRGKSIAD VLEMTITEAA EFFTDFPRIL RILTTMQSVG LGYLKLGQPS PMLSGGEAQR
IKLSAELAKI QTGNTLYILD EPTTGLHFQD IQHLLEVLRK LVDKGNSVII IEHNLDIIKN
SDWIIDIGPE GGNEGGNIIA EGTPEQIAQT EHSYTGQFLK AEMGIV
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