| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0564 |
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| Symbol | |
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| ID | 6461829 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 550291 |
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| End bp | 551695 |
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| Gene Length | 1405 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 642924009 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00401802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAAAG GTACAAAAAA TAGCCGCAAA AAAGACCATC ACATCAGTTC TGTCGGGACA
ACCAATGATT GTATTACCAA CCGTGCTGGG CTGACATTGT TCGCCACCTA TCTGCAGAGT
ATTCAGCTCA TGCCGATTAT GGATGAAATG TTTTGTGCCA TGCGAAAAAA CAAAAAAGGC
GTCCCGGTTG TTGATCTGCT TCTTCAATTG TTGTGCTTTT TTATGGATGG TACCAGCCGT
CACCTGACGC AGTTCGACCA GCTCAAAAAA GAAAGGAGCT ATGCTCCGCT GATTGGCTGT
AAGCCAGAGC ACTTGGCATC GTCTCATGCA GTCAAGAGAT TTTTTGGAAT TTTCTCTTTT
CATCAAGTCA AGCTGTTCCG TTATTTATTG CAAAAGATTT TTTTGTGGCG TCTGAAAATT
GATCAGCCCG CAGTTATTGA ACTGGGTATT GATTCTATGG TGATGGATAA TAATGATGCT
CTGAAACGAG AAGGTGTTGA ACCAACGTAC AAGAAAGTCA ACGGTTTTCA TCCCGTACAA
ATGAATTGGG GCAGGTACTT TGTTGATGCT GTTTTCCGTG TTGGCTCAGA TCATTCAAAT
CATGGTCAAA CGGTTGAAAT GATGATACGT CATATTGTTG CTACGATCAG AAAGGAGTAT
CGTGTTAACG TACCGATCAT TATTCGAATG GATTCCGGCT TCTACGATCA GAAGTTGTTC
CAAAACCTGT GAGTCGTTGC ATGTTGGTTA TATATGCGGC GGAAAGCTTT ACGACAATGT
AAAAAAAGCT GCGGAGGAGA ACGCCAATTG GTCTAACTTT AACTCGCACA ATAAAAAGGA
GATATGGGAG TATACCGAGT TTATGTGTCA ACAAGAAACT TGGGATTTGG CCCGTCGGAC
GATTTATAGT CGTATGATTC AGCATGACCG GCAACTTGTC GTACCTGGAC TGGGTACTGA
TAGCGTCATC GTCACCAACA TTGGTATGGG TTGTTGTTTG ATTGACGAAC TTCTCTATCA
AGCCGGTGCC GAGAATCTTC TTTTCGCTCA CGATATTCTC GGAAACTATC ACCAGCGTGG
CAATGATGAA TTGGCCAACC GTGCCATCAA AAACTTTGGC GAAGAACAAT TACCCTTCAA
GTATTTTTAT GCTAATGCAG CATGGTACTT TCTCATGCTG CTTGGTAATA ATCTGTTCGA
GAGCTTCAAA GCAGATGTCA GCTCATCAGT TATTGCTACA ACAGTTTATG CAGATACATT
TCGTCGGCAG CTTATTGATA CCGCAGCCAA AATTGTTCGT AATGGCAAAA AGCTTATGAT
GAAAGTTCCA ACGGACTGCT TTCATCGGCT GCAATTCGAT AAACTCTTTG AGCGCTGTTT
AAACGTTACT GTTTTGATGT GTTAA
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| Protein sequence | |
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