| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0529 |
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| Symbol | |
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| ID | 6461956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 518867 |
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| End bp | 519925 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726815 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_002017470 |
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| Protein GI | 194335676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0517] FOG: CBS domain
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCATTA CTGAAGAAAT CTGGCGTCAG GCCATCCTTC CAATGTCCGC TTCTCTTGAG
GAGGTAATAA CCAATCTTAC AAAGGTTTCG ATTAAGATTG TGTTAGTGGT TAATGAAGCG
GGTGAGTTGC AAGGCACCAT TTCAGACGGA GATATTCGGC GTGGATTGCT TCGGGGGTTG
AATCTCATAA GCCCAATCGA AAGTATTATC CACCATAATC CGCTGGTTGT CACGGAGGAA
TTAGGGCGTG AAGCTGTTCG GAAGTTAATG GTTGTTAACA AAATCCAGCA GGTGCCTGTT
GTTGATGACC AACACCATAT TGTAGGCTTG TATCTTTGGG ATGAAATCGC GAAACCAATC
CTGCGACCTA ACCTGATGGT TATCATGGCT GGCGGTATGG GTACCCGGCT TCGTCCGCAT
ACAGAAAACT GCCCGAAGCC GATGTTGTCG GTTTCCGGCA AGCCCATGCT TGAACACATC
ATTGAGCGTG CAAAGCAGGA GGGGTTCAGC CACTTTGTGT TGGCAATAAA CTATCTTGGC
CATGTCATTG AAAATTACTT TGGAGATGGG ACTTGCTTAC AAGTGCGGAT CGATTACCTA
AAAGAGAAAT CCCCCTTGGG CACAGCAGGT GCCTTAGGGT TGCTGAATCC GTGGCCAACG
CTGCCCTTTG CCGTAACCAA TGGCGATGTT ATGACAGACA TTCACTATGG TGAGCTACTC
GATTTCCACA CTCGTCATAA TGCTGCTGCC ACCATGGCTG TGCGGGTGCA TGAATGGCAA
CACCCATTTG GTGTAGTACA GACCGATGGA ATTGATATTA TAGGGTTTGA AGAGAAGCCT
GTGCATCGAA GCCATATCAA TGCTGGAGTG TACGTGCTTG AACCAGAAGC TCTTTGTTTT
CTTGAAAAAA ACGTTCGTTG CGATATGCCG GCGTTGTTTG AACGCCTGCA GGCAAAAGAG
AAGAGGACTG CCGCCTATCC AATACATGAA CCATGGCTGG ATGTGGGCAG GCAAGAGGAT
TTGACCCGCG CTAACATGGA TAATAAAATC AAACCGTAA
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| Protein sequence | MTITEEIWRQ AILPMSASLE EVITNLTKVS IKIVLVVNEA GELQGTISDG DIRRGLLRGL
NLISPIESII HHNPLVVTEE LGREAVRKLM VVNKIQQVPV VDDQHHIVGL YLWDEIAKPI
LRPNLMVIMA GGMGTRLRPH TENCPKPMLS VSGKPMLEHI IERAKQEGFS HFVLAINYLG
HVIENYFGDG TCLQVRIDYL KEKSPLGTAG ALGLLNPWPT LPFAVTNGDV MTDIHYGELL
DFHTRHNAAA TMAVRVHEWQ HPFGVVQTDG IDIIGFEEKP VHRSHINAGV YVLEPEALCF
LEKNVRCDMP ALFERLQAKE KRTAAYPIHE PWLDVGRQED LTRANMDNKI KP
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