Gene Ppha_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0528 
Symbol 
ID6461962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp517688 
End bp518851 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content48% 
IMG OID642726814 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002017469 
Protein GI194335675 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCA AGATTTGCGT TATCACTGGC ACCCGTGCTG AATATGGCTT GTTGCGTTGG 
GTCATGCAGG GCATCAAGGA TGACCCTGAG CTGACGCTGC AAATCATTGC CACCGGTATG 
CACCTGTCGC CTGAATTTGG TTTGACCTAT CGCAACATTG AGCAGGATGG ATTCCAGATA 
GATCGCAAGG TTGAAATGCT CACCAGCTCC GATACTGCTG TTGGCATAGC AAAGTCCATG 
GGTCTCGGGT TGATCGGTTT TGCTGATGTC TTGAATGAAT TGAAGCCAGA TTTGATTGTA 
GTGCTCGGTG ACCGGTTTGA AATTTTCTCG GCAGTCTCGG CGGCGTTGGT TGCTCGTATT 
CCAGTTGCCC ACTTGCATGG AGGTGAACTG ACCGAAGGCG CTTTTGATGA TGCTATCCGG 
CATTCCATAA CCAAAATGTC GCACCTCCAT TTTGTTGCTG CTGAAGAATA CCGGCAGCGC 
GTGATCCAAC TGGGAGAGCA ACCGGATCAT GTTTTTCTGG TAGGTGGGCT TGGTATTGAC 
AACATTAAGC GTCTGAAGCT TCTCGATCGC GAGGAGTTGG AAGCTTCAAT TGACTTGAGG 
CTTGGGCCTA AAAATCTGCT CATCACTTTT CATCCGGTTA CTCTTGAGAC CGCAACTGCA 
GCAGAGCAAA TGGCAGAACT GCTTGCGGCA TTGGCAGAAT TTGAGGATAC ACAGCTAATA 
TTTACCATGC CGAATGCCGA CAACGGTGGG CGTGTGATGA TCAGAATGGT GGAAGAATTT 
GTAGCACAGC ACACTAACGC ACGAGCGTAC ACATCCCTTG GGCAACTCCG CTATTTGTCA 
TGCGTTTCAA ATGTCGATGG TGTTGTGGGT AACTCTTCCA GCGGTTTGGC CGAAGTGCCC 
AGTTTCTGCA AAGGCACTGT TAACATTGGT GATCGCCAAA GGGGTCGGCT TCAAGCGGAA 
AGTGTGATCA ACTGTGAACC GACTCGTAAG AGCATTGCAG GCGCCATTAA CAAACTTTAT 
TCTACCGATT TTCAACTAAT CTTGAGCAAG CTTGCAAACC CCTATGGAGA TGGCGGTGCA 
AGTGAAAAAG TTGTTGAAAT ATTAAAAAAC CATGCACTGT GCGGAATGAT AAAAAAGATT 
TTTTATGACC TTTGTAATGA ATGA
 
Protein sequence
MTRKICVITG TRAEYGLLRW VMQGIKDDPE LTLQIIATGM HLSPEFGLTY RNIEQDGFQI 
DRKVEMLTSS DTAVGIAKSM GLGLIGFADV LNELKPDLIV VLGDRFEIFS AVSAALVARI 
PVAHLHGGEL TEGAFDDAIR HSITKMSHLH FVAAEEYRQR VIQLGEQPDH VFLVGGLGID 
NIKRLKLLDR EELEASIDLR LGPKNLLITF HPVTLETATA AEQMAELLAA LAEFEDTQLI 
FTMPNADNGG RVMIRMVEEF VAQHTNARAY TSLGQLRYLS CVSNVDGVVG NSSSGLAEVP 
SFCKGTVNIG DRQRGRLQAE SVINCEPTRK SIAGAINKLY STDFQLILSK LANPYGDGGA 
SEKVVEILKN HALCGMIKKI FYDLCNE