Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0519 |
Symbol | |
ID | 6461993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 506645 |
End bp | 509104 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642726805 |
Product | capsular exopolysaccharide family |
Protein accession | YP_002017460 |
Protein GI | 194335666 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTTG AAAAAGAGAC AACCCTCTCC ACTCAGAGCA ACAATGAGCA AACCCAGGGG AGCGAGATCT CTCTTGGAGA GATCCTTAAG ATTATCCTTC GCCGAAAATA TGGTATTCTT CTCATTCTTA TAGCCAGCCT TGTTATGGCG TGGATATACA ATAAGGCGCA AACGCCTGAA TACCATGCTG TGTCGGTCAT GATGATCAAT GAAAACAAGG CGCCGGGCGA TCTGCTTGCA ACGCTTCTCG GCCCGAGTGC AGGTGTTGAC ACAAAGTCGG CCAGAAAAGA TGTTGAACTG CTCCAATCCC ACCCTATTGC AGAACTCACC GTAAAGGAGC TCTATAAAAC CACCCGCAAG GACTCCCTTG AATTTTTCGG AAAGAGGAAA TATGTCTCCC CCATCGATTT TCTTTTCAGC GCTATTGACG TTTTTCATCC TCTTAATGCC GATCAGAAAG CGGAAGCGTG GCACTATTCC GATGCTCTTT TACGCTTTCA TGCCATGCAG CTCAAAGACC GCATCAGGGT TATACCACTT CGCGACACCA ATCTCCTGCA GGTCTCGGTT GCAAGCCCTT TCGCGGATGA AGCTGTTTTT TTGACCAATA TCCTCTGCCA AACCTACAAA AATGCGGACA TCATCCGTAA TTCTGAGAAG TACACCCAGG CAAACAAGTT TATTGCTGAA ATGATTCAGG ATCAGCAGCA GAAGGTCGGA GAGGCTGATA ATGCTCTTTC GCAGTATATG CAAGCCAACA AAATTTACGA GGTGAGCGGC AATACTGGCG CCATTCTTGC CAAAGTTGTT GATGCTGACG CACGATATAA TGATATCAAG GCAGAATCAC GTATAGCGAG TAATAGTCTT GCCTTTCTTG AAAAAAAGCT CTCGGATACC GACAGGGAGA TCAGTTCACG TATAGCAAAA AATGTCAACA GCCAGCTTGG CGCAATCATG GATGAGTTGC GGACTCTTGA GAGTGACTAT ATTAAAATGG TTCGGGAAAA GGGGATTGAT AATCCTGAGG TCAAGATAAA ACGGCAACAG CTTGATGTGG TAAAAACACG CTATGAGCAG CTCAGCCGCA GCAAGATTGC CGGTGAAATC GGGTATGCTG GCAAGGCCCA GAAATTCAGT TTCGACATGG TTTCCGAAAA ACTCCAGATC GAGCGGAAAC TCAATGACCT CAACTTCAGC GCCAGTGAGT TCAGCCTCCT GAAGCAATAT TACGAGAGCC AGCTCTCGAT GCTGCCAATA AAACAGCAGG AATTTATCAA ACTGCAGAGA GACAAGGAGG TTGTCGGCAA AACCTATCTC TATCTGAAAG AGAAGCTCGA TGAAACCCGT ATCATGCTCG GTTCCGAAGT TGGCGGCGTC TCCATTATCG GGTCGGCATT CAAGCCATTT TCTCCGGAAA AGCCCGTGCT GTCAAGAGAT CTTCTTGCGG GATTTATTCT TGGCGGACTG CTCGCCGTCC TCTATACCTT CGGTGCAGAG ATGGCTGATA ATACGGTTAA GGATGATCTT TTTTTCCGTG ATCTTGGCCT GACGGTGCTC TCCGTTATTC CTTTGGTGGG TCAGAAGGGA CAAACCCCTT TTCTTGATAA CAAAGAATCA TTCATAAAGA GATTCCTTTA CAGCAAAAGC CAGGCTTTTC GTGAAAAAGT GCTCTCTGAA GCAAGCGTAA AAGGGGCTCT TCCCATGCCG ATGATAACCG ACAGTCTAAG TTCAGCTTTT GCGGAAAGTT TCCGGACGCT TCGAACCGCT CTCGATTACA GTCGCGTCGA TTTCTCCCGT ATAGACAGCT CGCTCAAATT TATCCTTGTT TCGGGAACAG CCATGACTGA AGGGAAGTCG ACCGTTTGTG CCAATCTTGG AATGGCATAT GCTATCAGCG GCAAAAAGAC GCTTATCATT GACTGTGATT TACGACGCGC GTCACAGCAT AAAAAATTAA ACGTTAAGAG AGAACCGGGT TTGACCGATT TTCTCTACAG TCAGCAGGCG AACATTGATG AGAGCTTTTT TCAGCCGACG CATATCGAGA ACCTGTTTGT ACTCAGTGCA GGTAAAAAAG TTCCAAACCC CAATGAAATT CTTGGGTCTC AAAAAATGAT ACGCCTCCTT AAAGAGCTTG ACGGAAAGTT CGACAAGGTA GTCTTCGATT CGCCTCCGCT CTTCCTGAGT GATGCTGCAC AGCTTGCCCA TTCGGTTGAC GGTGTTCTTC TTGCTGCCCG AATGCATTTT ACCAATAAAG ATCCGATCAG GAATTTTGCA GTCGACCATT TTCTCAGGCC ACTTATTCTT GGCGTTGCCA TGATCGAATC TCGTGATTCC CAGCGCTATG GGTACGGCTA TGGCAAGTAC GGCTATGGCA AGTACGGCTA TGGCAAGTAC GGCTATGGCA AGTACGGCTA TGGCAAGTAC GGCTATGGCC AATATGAAGA AGAGGCTTAA
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Protein sequence | MMVEKETTLS TQSNNEQTQG SEISLGEILK IILRRKYGIL LILIASLVMA WIYNKAQTPE YHAVSVMMIN ENKAPGDLLA TLLGPSAGVD TKSARKDVEL LQSHPIAELT VKELYKTTRK DSLEFFGKRK YVSPIDFLFS AIDVFHPLNA DQKAEAWHYS DALLRFHAMQ LKDRIRVIPL RDTNLLQVSV ASPFADEAVF LTNILCQTYK NADIIRNSEK YTQANKFIAE MIQDQQQKVG EADNALSQYM QANKIYEVSG NTGAILAKVV DADARYNDIK AESRIASNSL AFLEKKLSDT DREISSRIAK NVNSQLGAIM DELRTLESDY IKMVREKGID NPEVKIKRQQ LDVVKTRYEQ LSRSKIAGEI GYAGKAQKFS FDMVSEKLQI ERKLNDLNFS ASEFSLLKQY YESQLSMLPI KQQEFIKLQR DKEVVGKTYL YLKEKLDETR IMLGSEVGGV SIIGSAFKPF SPEKPVLSRD LLAGFILGGL LAVLYTFGAE MADNTVKDDL FFRDLGLTVL SVIPLVGQKG QTPFLDNKES FIKRFLYSKS QAFREKVLSE ASVKGALPMP MITDSLSSAF AESFRTLRTA LDYSRVDFSR IDSSLKFILV SGTAMTEGKS TVCANLGMAY AISGKKTLII DCDLRRASQH KKLNVKREPG LTDFLYSQQA NIDESFFQPT HIENLFVLSA GKKVPNPNEI LGSQKMIRLL KELDGKFDKV VFDSPPLFLS DAAQLAHSVD GVLLAARMHF TNKDPIRNFA VDHFLRPLIL GVAMIESRDS QRYGYGYGKY GYGKYGYGKY GYGKYGYGKY GYGQYEEEA
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