Gene Ppha_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0464 
SymbolgltX 
ID6462145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp450892 
End bp452400 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content50% 
IMG OID642726751 
Productglutamyl-tRNA synthetase 
Protein accessionYP_002017407 
Protein GI194335613 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.295765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGTC AAAGGGTTAG AACCAGGTTT GCACCTTCTC CAACAGGATA TTTGCATGTA 
GGCGGTCTGC GAACCGCCCT GTATAACTAC CTGTTTGCAA AAAAAATGCA CGGAGACTTC
ATTATCAGAA TTGAAGACAC CGATCAAACT CGGAAAGTTG AGGGGGCGCA GCAGAATCTT
ATCAAGGCCC TTGAATGGGC AGGAATTGTG GCTGATGAAA GTCCTGAAAA AGGTGGCAAC
TATGGTCCCT ACGTCCAGTC CGAGCGACTT GATCTCTACG GACGTTACTG TCAGCAACTG
CTCGACGACC AGCATGCCTA TTACTGTTTC GCAACGCACG AGGAGCTTGA AGAGAACCGG
CAGCTCCAGA TAAAACAGGG TCTTCAGCCG AAATACAACA GAAAATGGCT CCCTGAAGAG
ATGGGTGGTT CCATGCCGCC GAGTGTCATC AGAAAAAAAC TTGACGAAGG GGGCCCCTAC
GTCATTCGCA TGAAAGTGCC CGATTACGTT TCAGTCTGGT TTGAGGATAT CATCCGCGGT
CCCGTCGAAT TTGATTCCGC AACCATAGAC GATCAGGTGC TGATGAAATC AGATGGTTTT
CCGACCTACC ATTTTGCAAG CGTCATTGAT GATCACTTGA TGGAGTTCAC CCATATCATC
AGAGGCGAAG AGTGGCTCTC CTCCATGCCA AAGCACCTTC TTCTCTACGA ATTTTTTGGC
TGGGAACCAC CCAAGGTTGC TCATCTGCCG CTTCTGCTCA ATGCTGACCG TTCAAAACTC
AGCAAAAGGC AGGGAGATGT TGCCGTCGAA GACTATATCC GCAAAGGGTA CAGCAATGAT
GCCATCATCA ATTTTGTAGC CATGCTCGGC TGGAACGAAG GAGAGGGGAG CGAGCAGGAG
GTCTACAGCA TGGAGCAGCT TATTGAAAAA TTCTCGCTCG AACGGGTAGG CAAGGCCGGT
GCTGTTTTCA ACATCGATAA ACTCAACTGG CTCGAAAAAC AGTACATCAA GAATCGGCCC
ACAGAGCAGC TTGTTCCCGT CATAAAACCG ATTCTTCTGG CCGAGCTTGA GCGCAAGGAG
ACGATGATGC CCGTCGACCT CATCACCAGT GAAGCCTACC TTGAAAAAGT TATCGAGCTG
ATGCGCGAGC GCGTCGGATT TGAGCACGAA TTTGTAACCT TTTCCTCCTA TTTCTTTTTC
GAGCCCGACT CCTATGATGA GGAAGCCGTC AAGAAGCGGT GGGCGCCCGA CACCAACTCA
CTGCTTCAGG AGTTTACCGA AATACTCGCC ACCCTCGAAG AGTTCAGTGC AGAGAACATC
GAAGCGCATC TCAAGGAGTT TGTTGCCCCG AAAGGTCTGA AAGCAGCAGC GCTCATACAC
CCCCTGAGAA TAGTCTCCTC CGGAGTGAGT TTTGGCCCGA GTCTCTACCA CATGCTCGAA
GTACTCGGCA AAGAGACCGT ACTTCGCCGC ATTCTGAAAG GGAGAGAAAA AATCACCTTT
TCGGCGTAG
 
Protein sequence
MVGQRVRTRF APSPTGYLHV GGLRTALYNY LFAKKMHGDF IIRIEDTDQT RKVEGAQQNL 
IKALEWAGIV ADESPEKGGN YGPYVQSERL DLYGRYCQQL LDDQHAYYCF ATHEELEENR
QLQIKQGLQP KYNRKWLPEE MGGSMPPSVI RKKLDEGGPY VIRMKVPDYV SVWFEDIIRG
PVEFDSATID DQVLMKSDGF PTYHFASVID DHLMEFTHII RGEEWLSSMP KHLLLYEFFG
WEPPKVAHLP LLLNADRSKL SKRQGDVAVE DYIRKGYSND AIINFVAMLG WNEGEGSEQE
VYSMEQLIEK FSLERVGKAG AVFNIDKLNW LEKQYIKNRP TEQLVPVIKP ILLAELERKE
TMMPVDLITS EAYLEKVIEL MRERVGFEHE FVTFSSYFFF EPDSYDEEAV KKRWAPDTNS
LLQEFTEILA TLEEFSAENI EAHLKEFVAP KGLKAAALIH PLRIVSSGVS FGPSLYHMLE
VLGKETVLRR ILKGREKITF SA